TargetScan_82 megaCluster: 1 Residual: 0.12

Summary

Title Cluster Residual Bicluster Conditions Residual Permutation P-Value Var. Exp. First PC Var. Exp. First PC Perm. P-Value
TargetScan_82 1 0.12 15 0 0.968087 0

Members

Displaying 1 - 14 of 14
100504453 predicted gene, 20236

Details for - - predicted gene, 20236

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 100504453

Tuberculist Genomic Region

11796 baculoviral IAP repeat-containing 3

Details for RP24-318P17.1 - baculoviral IAP repeat-containing 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 11796

Tuberculist Genomic Region

14011 ets variant gene 6 (TEL oncogene)

Details for - - ets variant gene 6 (TEL oncogene)

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14011

Tuberculist Genomic Region

14630 glutamate-cysteine ligase, modifier subunit

Details for - - glutamate-cysteine ligase, modifier subunit

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 14630

Tuberculist Genomic Region

18578 phosphodiesterase 4B, cAMP specific

Details for RP23-57D24.1 - phosphodiesterase 4B, cAMP specific

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 18578

Tuberculist Genomic Region

19108 protein kinase, X-linked

Details for RP23-91C19.5 - protein kinase, X-linked

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19108

Tuberculist Genomic Region

20310 chemokine (C-X-C motif) ligand 2

Details for - - chemokine (C-X-C motif) ligand 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 20310

Tuberculist Genomic Region

219140 spermatogenesis associated 13

Details for - - spermatogenesis associated 13

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 219140

Tuberculist Genomic Region

21929 tumor necrosis factor, alpha-induced protein 3

Details for - - tumor necrosis factor, alpha-induced protein 3

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 21929

Tuberculist Genomic Region

19225 prostaglandin-endoperoxide synthase 2

Details for - - prostaglandin-endoperoxide synthase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19225

Tuberculist Genomic Region

19663 RNA binding protein gene with multiple splicing

Details for - - RNA binding protein gene with multiple splicing

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 19663

Tuberculist Genomic Region

210106 PAP associated domain containing 7

Details for - - PAP associated domain containing 7

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 210106

Tuberculist Genomic Region

214133 tet methylcytosine dioxygenase 2

Details for - - tet methylcytosine dioxygenase 2

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 214133

Tuberculist Genomic Region

231991 cAMP responsive element binding protein 5

Details for - - cAMP responsive element binding protein 5

GO Terms: NA

PATRIC Pathways: [field_patric_pathways]

Essentiality: Griffin Essential: [field_griffin_essential] | In vitro Essential: [field_in_vitro_essential] | In vivo Essential: [field_in_vivo_essential]

Go to Gene Page: 231991

Tuberculist Genomic Region

TFBS DB TF

GO Terms

Displaying 1 - 1 of 1
GO Terms
NA

Upstream MEME Motif

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif2 E-Value Motif2 Consensus Motif2 Matches
530 TTGYTTSCTTT NA 430 AAAATAAAANTA NA

Upstream Weeder Motif

Motif1 Score Motif1 Consensus Motif1 Matches Motif2 Score Motif2 Consensus Motif2 Matches
1.47 NCCGCG NA 1.75 CGCACGTC NA

3p UTR Weeder

Motif1 E-Value Motif1 Consensus Motif1 Matches Motif1 Model Motif2 E-Value Motif2 Consensus Motif2 Matches Motif2 Model
0.83 GTNGTA NA NA 1.2 TCGTACGT NA NA

3p UTR PITA

miRNAs percTargets pValue
mmu-miR-410 0.9 0.0000462

3p UTR TargetScan

miRNAs percTargets pValue
mmu-miR-217 0.636364 0.0000135

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