Module 457 Residual: 0.53

Title Bicluster Model Residual Score
bicluster_0457 v02 0.53 -7.56
Displaying 1 - 9 of 9
Rv0899 Outer membrane protein

Details for Rv0899 - Outer membrane protein

GO Terms: GO:0005829, GO:0005887, GO:0010447, GO:0015288, GO:0044121

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.15 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0899

Tuberculist Genomic Region

Rv0901 POSSIBLE CONSERVED EXPORTED OR MEMBRANE PROTEIN

Details for Rv0901 - POSSIBLE CONSERVED EXPORTED OR MEMBRANE PROTEIN

GO Terms: GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.43 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv0901

Tuberculist Genomic Region

Rv2183c

Details for Rv2183c -

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.78 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2183c

Tuberculist Genomic Region

Rv2185c

Details for Rv2185c -

GO Terms: GO:0001666, GO:0005886

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.96 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2185c

Tuberculist Genomic Region

Rv0900 POSSIBLE MEMBRANE PROTEIN

Details for Rv0900 - POSSIBLE MEMBRANE PROTEIN

GO Terms: GO:0040007, GO:0044119

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.63 | In vitro Essential: 0.19 | In vivo Essential: NA

Go to Gene Page: Rv0900

Tuberculist Genomic Region

Rv2184c Arsenical pump-driving ATPase (EC 3.6.3.16)

Details for Rv2184c - Arsenical pump-driving ATPase (EC 3.6.3.16)

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.99 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2184c

Tuberculist Genomic Region

Rv2187 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

Details for Rv2187 - Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)

GO Terms: GO:0004467, GO:0005886

PATRIC Pathways: Fatty acid metabolism

Essentiality: Griffin Essential: 1.00 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv2187

Tuberculist Genomic Region

Rv3556c Probable acetyl-CoA acetyltransferase FadA6 (EC 2.3.1.9)

Details for Rv3556c - Probable acetyl-CoA acetyltransferase FadA6 (EC 2.3.1.9)

GO Terms: GO:0052572

PATRIC Pathways: Propanoate metabolism, Pyruvate metabolism, Benzoate degradation via hydroxylation, Valine, leucine and isoleucine degradation, Glyoxylate and dicarboxylate metabolism, Terpenoid backbone biosynthesis, Butanoate metabolism, Reductive carboxylate cycle (CO2 fixation), Fatty acid metabolism, Lysine degradation, Tryptophan metabolism, Synthesis and degradation of ketone bodies

Essentiality: Griffin Essential: 0.12 | In vitro Essential: NA | In vivo Essential: 0.26

Go to Gene Page: Rv3556c

Tuberculist Genomic Region

Rv3557c Transcriptional factor in putative operon for degradation of branched-chain alkanes, nitroalkanes and may be also cyclic ketones, alkenoic acids

Details for Rv3557c - Transcriptional factor in putative operon for degradation of branched-chain alkanes, nitroalkanes and may be also cyclic ketones, alkenoic acids

GO Terms: NA

PATRIC Pathways: Not assigned

Essentiality: Griffin Essential: 0.87 | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: Rv3557c

Tuberculist Genomic Region

Displaying 1 - 1 of 1
Motif 1 Motif 2
e-value: 2200 e-value: 4000
Displaying 1 - 1 of 1
Module GO Term Enrichment Descriptions
No enrichment
Displaying 1 - 12 of 12
GO:0005829 |

cytosol

GO:0005887 |

integral to plasma membrane

GO:0010447 |

response to acidity

GO:0015288 |

porin activity

GO:0044121 |

growth of symbiont in host organelle

GO:0005886 |

plasma membrane

GO:0001666 |

response to hypoxia

GO:0040007 |

growth

GO:0044119 |

growth of symbiont in host cell

GO:0004467 |

long-chain fatty acid-CoA ligase activity

GO:0052572 |

response to host immune response