Rv0302 TetR/ACRR family transcriptional regulator

Rv0302 (TetR/ACRR family transcriptional regulator) is predicted to be co-regulated in modules bicluster_0140 with residual 0.62 and bicluster_0493 with residual 0.66.

This regulation is possibly mediated by two de-novo identified cis-regulatory motifs in each module with e-values , 0.00 and 0.00 for bicluster_0140 and 0.02 and 25.00 for bicluster_0493 respectively.

These modules are enriched for following go terms: .

This gene is found to be for growth on cholesterol.

Mutant available?: Yes

Displaying 81 - 90 of 99
Gene Target Differential Expression Distance Expression pvalue Type
No -69 0.27 0.962042 Primary.TSS
ATPase
No -128 0 0.997972 CDS
Multidrug resistance protein B
No 56 0.05 0.9889 Internal.TSS
Probable L-lysine-epsilon aminotransferase (EC 2.6.1.36) (L-lysine aminotransferase) (Lysine 6-aminotransferase)
No -107 0.29 0.962042 Primary.TSS
Phosphate transport system regulatory protein PhoU
No 43 -0.17 0.952708 Primary.TSS
PPE family protein
No 27 -0.06 0.990324 Internal.TSS
POSSIBLE TRANSMEMBRANE PROTEIN
No 56 -0.04 0.99224 CDS
Beta-lactamase (EC 3.5.2.6)
No -28 0.09 0.972986 Primary.TSS
Mobile element protein
No -7 0.04 0.987371 CDS
No -1 0.06 0.987371 CDS
not assigned to any KEGG Pathway.
No TFOE experiment results were found

TRIP log2 fold abundance change

NA
Displaying 1 - 17 of 17
Condition Count Day Doublings Fitness U.I Plots
D0U 27 0 0.00 11.02 U
D3I 3 3 3.83 10.03 I
D3U 3 3 3.83 9.23 U
D5I 9 5 6.00 10.72 I
D5U 17 5 6.00 10.49 U
D7I 18 7 8.14 10.41 I
D7U 19 7 8.14 9.86 U
D14I 4 14 15.63 7.53 I
D14U 4 14 15.63 7.84 U
D17I 3 17 19.15 7.64 I
D17U 3 17 19.15 7.48 U
D21I 4 21 23.23 7.18 I
D21U 4 21 23.23 7.61 U
D24I 3 24 26.60 6.10 I
D24U 3 24 26.60 6.69 U
D28I 4 28 30.61 6.29 I
D28U 4 28 30.61 7.23 U