Rv0421c
Details for Rv0421c -
GO Terms: GO:0005829
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.27 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv0421c
Tuberculist Genomic Region
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Rv0783c Inner membrane component of tripartite multidrug resistance system
Details for Rv0783c - Inner membrane component of tripartite multidrug resistance system
GO Terms: NA
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.19 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv0783c
Tuberculist Genomic Region
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Rv1016c lipoprotein, putative
Details for Rv1016c - lipoprotein, putative
GO Terms: NA
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.83 |
In vitro Essential: NA |
In vivo Essential: 0.23
Go to Gene Page: Rv1016c
Tuberculist Genomic Region
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Rv1022
Details for Rv1022 -
GO Terms: NA
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.21 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv1022
Tuberculist Genomic Region
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Rv2403c Lipoprotein LppR
Details for Rv2403c - Lipoprotein LppR
GO Terms: NA
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.59 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv2403c
Tuberculist Genomic Region
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Rv2404c Translation elongation factor LepA
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Rv2945c Putative lipoprotein LppX precursor
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Rv2946c Malonyl CoA-acyl carrier protein transacylase (EC 2.3.1.39)
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Rv2947c (MTCY24G1.02), len: 496 aa, Probable polyketide synthase, almost identical to G560508 PKS002B (495 aa), fasta scores, opt: 3270, E(): 0, (99.6% identity in 496 aa overlap); contains PS00606 Beta-ketoacyl synthases active site; similar to MTCY338.20 (49.9% identity in 465 aa overlap) and MTCY24G1.09 (50.2% identity in 454 aa overlap) and MTCY22H8.03 (47.6% identity in 437 aa overlap)
Details for Rv2947c - (MTCY24G1.02), len: 496 aa, Probable polyketide synthase, almost identical to G560508 PKS002B (495 aa), fasta scores, opt: 3270, E(): 0, (99.6% identity in 496 aa overlap); contains PS00606 Beta-ketoacyl synthases active site; similar to MTCY338.20 (49.9% identity in 465 aa overlap) and MTCY24G1.09 (50.2% identity in 454 aa overlap) and MTCY22H8.03 (47.6% identity in 437 aa overlap)
GO Terms: GO:0005829, GO:0009247
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 1.00 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv2947c
Tuberculist Genomic Region
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Rv2948c Long-chain fatty-acid-CoA ligase (EC 6.2.1.3), Mycobacterial subgroup FadD22
Details for Rv2948c - Long-chain fatty-acid-CoA ligase (EC 6.2.1.3), Mycobacterial subgroup FadD22
GO Terms: GO:0009247, GO:0016874
PATRIC Pathways: Fatty acid metabolism
Essentiality:
Griffin Essential: 0.95 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv2948c
Tuberculist Genomic Region
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Rv2949c Chorismate--pyruvate lyase (EC 4.1.3.40)
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Rv3300c Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
Details for Rv3300c - Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70)
GO Terms: GO:0004730, GO:0005886
PATRIC Pathways: Pyrimidine metabolism
Essentiality:
Griffin Essential: 0.94 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv3300c
Tuberculist Genomic Region
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Rv3372 Trehalose-6-phosphate phosphatase (EC 3.1.3.12)
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Rv3373 Enoyl-CoA hydratase (EC 4.2.1.17)
Details for Rv3373 - Enoyl-CoA hydratase (EC 4.2.1.17)
GO Terms: NA
PATRIC Pathways: Valine, leucine and isoleucine degradation, beta-Alanine metabolism, 1,4-Dichlorobenzene degradation, Tryptophan metabolism, Fatty acid metabolism, Propanoate metabolism, alpha-Linolenic acid metabolism, Caprolactam degradation, Benzoate degradation via hydroxylation, Limonene and pinene degradation, Fatty acid elongation in mitochondria, Lysine degradation, Geraniol degradation, Butanoate metabolism
Essentiality:
Griffin Essential: 0.78 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv3373
Tuberculist Genomic Region
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Rv3374 Enoyl-CoA hydratase (EC 4.2.1.17)
Details for Rv3374 - Enoyl-CoA hydratase (EC 4.2.1.17)
GO Terms: NA
PATRIC Pathways: Caprolactam degradation, Benzoate degradation via hydroxylation, Fatty acid elongation in mitochondria, Butanoate metabolism, 1,4-Dichlorobenzene degradation, alpha-Linolenic acid metabolism, Tryptophan metabolism, Propanoate metabolism, Lysine degradation, Geraniol degradation, Fatty acid metabolism, beta-Alanine metabolism, Valine, leucine and isoleucine degradation, Limonene and pinene degradation
Essentiality:
Griffin Essential: 0.78 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv3374
Tuberculist Genomic Region
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Rv3375 Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein
Details for Rv3375 - Glutamyl-tRNA(Gln) amidotransferase subunit A-like protein
GO Terms: GO:0005829
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.75 |
In vitro Essential: NA |
In vivo Essential: 0.39
Go to Gene Page: Rv3375
Tuberculist Genomic Region
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Rv3481c PROBABLE INTEGRAL MEMBRANE PROTEIN
Details for Rv3481c - PROBABLE INTEGRAL MEMBRANE PROTEIN
GO Terms: NA
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.92 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv3481c
Tuberculist Genomic Region
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Rv3739c Predicted cobalt transporter in Mycobacteria
Details for Rv3739c - Predicted cobalt transporter in Mycobacteria
GO Terms: NA
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.36 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv3739c
Tuberculist Genomic Region
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Rv3790 Oxidoreductase, FAD-binding protein
Details for Rv3790 - Oxidoreductase, FAD-binding protein
GO Terms: GO:0005886, GO:0040007
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 0.00 |
In vitro Essential: 0.04 |
In vivo Essential: NA
Go to Gene Page: Rv3790
Tuberculist Genomic Region
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Rv3792 putative membrane protein
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Rv3796 Putative uncharacterized protein BCG_3858
Details for Rv3796 - Putative uncharacterized protein BCG_3858
GO Terms: NA
PATRIC Pathways: Not assigned
Essentiality:
Griffin Essential: 1.00 |
In vitro Essential: NA |
In vivo Essential: NA
Go to Gene Page: Rv3796
Tuberculist Genomic Region
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Discussion