L0TCG5 sigJ, Rv3328c

Title id ORF names Protein names PubMed ID Short Synonyms EnsemblBacteria
L0TCG5 SIGJ_MYCTU
putative RNA polymerase sigma factor
ECF RNA polymerase sigma factor SigJ (ECF sigma factor SigJ) (Alternative RNA polymerase sigma factor SigJ) (RNA polymerase sigma-J factor) (Sigma-J factor) 9634230, 11506908, 15321691, 16483748, 18248429 sigJ sigJ, Rv3328c CCP46149,
Domain InterPro Pfam ProDom Region Similarity SUPFAM
The sigma-70 factor domain-2 mediates sequence-specific interaction with the -10 element in promoter DNA, and plays an important role in melting the double-stranded DNA and the formation of the transcription bubble. The sigma-70 factor domain-2 mediates interaction with the RNA polymerase subunits RpoB and RpoC (By similarity).; The sigma-70 factor domain-4 contains a helix-turn-helix (H-T-H) motif that mediates interaction with the -35 element in promoter DNA. The domain also mediates interaction with the RNA polymerase subunit RpoA. Interactions between sigma-70 factor domain-4 and anti-sigma factors prevents interaction of sigma factors with the RNA polymerase catalytic core (By similarity). PF04542, PF08281, PF12680 Belongs to the sigma-70 factor family. ECF subfamily. SSF88659, SSF88946
Gene3D HAMAP PANTHER Pfam PIRSF PRINTS ProDom PROSITE SMART SUPFAM
1.10.10.10, PF04542, PF08281, PF12680 SSF88659, SSF88946
PDB Protein Model Portal
EC number KEGG KO UniPathway
K03088,
HOGENOM KEGG KO OMA OrthoDB
K03088, RTHVREA,