DVU0003 DVU0003 DNA gyrase subunit B | Syntrophy Portal

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Desulfovibrio vulgaris Hildenborough

Summary

	Locus Tag	Symbol	Synonyms	Product	Protein Synonyms	Start	End	Strand	PubMed ID
DVU0003	DVU0003	gyrB	gyrB, DVU0003	DNA gyrase subunit B	DNA gyrase subunit B (EC 5.99.1.3)	2766	5162	+	15077118

Regulatory Modules

	Residual	Motif 1	Expression Plot
bicluster_0029	0.50
bicluster_0064	0.48

XReference

Uniprot	NCBI Gene	NCBI Protein	GI Number	MicrobesOnline	EnsemblBacteria	InterPro	EggNOG	OrthoDB
Q72G57	2794972	YP_009228.1;	46578420	208929	AAS94487	IPR002288, IPR011557, IPR003594, IPR020568, IPR014721, IPR001241, IPR013506, IPR013759, IPR013760, IPR018522, IPR006171	COG0187	EOG6P334W

Mutations

Line	Position	Effect	Impact	Class	Percent Frequency	Sample	Title

Transposon mutants

Title	Insert	TAG Module
DVU0003

Homology

Orthologues	Paralogues

Functions

Catalytic Activity	COG	EC Description	Protein families
ATP-dependent breakage, passage and rejoining of double-stranded DNA. {ECO:0000256\|HAMAP-Rule:MF_01898, ECO:0000256\|RuleBase:RU003363, ECO:0000256\|SAAS:SAAS00048791}.	(L) COG187 \| Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit	(5.99.1.3) DNA topoisomerase (ATP-hydrolyzing).	Type II topoisomerase family

Essentiality

WT.MOLS4	WT.MOLS4_NO3	WT.MOYLS4.1	WT.MOYLS4.2
0.03	0	0	0

Product Synonyms

Product (LegacyBRC)	Product (RefSeq)

Operon

Refseq

GI Number	Accession	Blast	Conserved Domains
46578420	YP_009228.1	Run

GO Terms

GO:0005524 GO:0003677 GO:0003918 GO:0006265 GO:0006261 GO:0005694 GO:0005737 GO:0000287 -

String Network

Link to STRINGS	STRINGS Network
DVU0003

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