DVU3023 DVU3023 Sigma-54 dependent DNA-binding response regulator | Syntrophy Portal

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Desulfovibrio vulgaris Hildenborough

Summary

	Locus Tag	Synonyms	Product	Protein Synonyms	Start	End	Strand	PubMed ID
DVU3023	DVU3023	DVU3023	Sigma-54 dependent DNA-binding response regulator	Sigma-54 dependent DNA-binding response regulator	3141933	3143357	+	15077118

Regulatory Modules

	Residual	Motif 1	Expression Plot
bicluster_0023	0.47

XReference

Uniprot	NCBI Gene	NCBI Protein	GI Number	MicrobesOnline	EnsemblBacteria	InterPro	EggNOG	OrthoDB
Q726T3	2796440	YP_012234.1;	46581426	208537	AAS97494	IPR003593, IPR011006, IPR027417, IPR001789, IPR002078, IPR025662, IPR025943	COG2204	EOG6WHNMG

Mutations

Line	Position	Effect	Impact	Class	Percent Frequency	Sample	Title
HR2	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_HR2_01	Chr-DVU3023-3142198-EP_HR2_01
HR2	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_HR2_05	Chr-DVU3023-3142198-EP_HR2_05
HR2	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_HR2_10	Chr-DVU3023-3142198-EP_HR2_10
UE3	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_UE3_10	Chr-DVU3023-3142198-EP_UE3_10
UE3	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_UE3_09	Chr-DVU3023-3142198-EP_UE3_09
UE3	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	EP_UE3_03	Chr-DVU3023-3142198-EP_UE3_03
UE3	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	UE3.152.03.D01	Chr-DVU3023-3142198-UE3.152.03.D01
HR2	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	HR2.152.10.D03	Chr-DVU3023-3142198-HR2.152.10.D03
HR2	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	HR2.152.05.D01	Chr-DVU3023-3142198-HR2.152.05.D01
HR2	3 142 198	NON_SYNONYMOUS_CODING		MISSENSE	100	HR2.152.05.D03	Chr-DVU3023-3142198-HR2.152.05.D03

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Transposon mutants

Title	Insert	TAG Module
BCD1228	del
DVU3023

Homology

Orthologues	Paralogues

Functions

COG
(T) COG2204 \| Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Essentiality

WT.MOLS4	WT.MOLS4_NO3	WT.MOYLS4.1	WT.MOYLS4.2

0.55	0.01	0.35	0.22

Product Synonyms

Product (LegacyBRC)	Product (RefSeq)

Operon

Refseq

GI Number	Accession	Blast	Conserved Domains
46581426	YP_012234.1	Run

GO Terms

GO:0005524 GO:0003677 GO:0000160 GO:0006355 GO:0006351 -

String Network

Link to STRINGS	STRINGS Network
DVU3023

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