DVU3023 DVU3023 Sigma-54 dependent DNA-binding response regulator

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
Desulfovibrio vulgaris Hildenborough

Help

Summary

Locus Tag Synonyms Product Protein Synonyms Start End Strand PubMed ID
DVU3023 DVU3023 DVU3023 Sigma-54 dependent DNA-binding response regulator Sigma-54 dependent DNA-binding response regulator 3141933 3143357 + 15077118

Regulatory Modules

Residual Expression Plot
bicluster_0023 0.47

XReference

Uniprot NCBI Gene NCBI Protein GI Number MicrobesOnline EnsemblBacteria InterPro EggNOG OrthoDB
Q726T3 2796440 YP_012234.1; 46581426 208537 AAS97494 IPR003593, IPR011006, IPR027417, IPR001789, IPR002078, IPR025662, IPR025943 COG2204 EOG6WHNMG

Mutations

Line Position Effect Impact Class Percent Frequency Sample Title
UE3 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 99 TG_UE3 Chr-DVU3023-3142198-TG_UE3
UE3 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 UE3.152.03.D01 Chr-DVU3023-3142198-UE3.152.03.D01
UR1 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 EG_UR1_45 Chr-DVU3023-3142198-EG_UR1_45
UE2 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 TG_UE2 Chr-DVU3023-3142198-TG_UE2
HR2 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 HR2.152.05.D01 Chr-DVU3023-3142198-HR2.152.05.D01
HA3 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 EG_HA3_76 Chr-DVU3023-3142198-EG_HA3_76
HA3 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 EG_HA3_15 Chr-DVU3023-3142198-EG_HA3_15
UA3 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 TG_UA3 Chr-DVU3023-3142198-TG_UA3
HR2 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 HR2.152.10.D03 Chr-DVU3023-3142198-HR2.152.10.D03
UR1 3 142 198 NON_SYNONYMOUS_CODING MISSENSE 100 EG_UR1_118 Chr-DVU3023-3142198-EG_UR1_118

Transposon mutants

Title Insert TAG Module
BCD1228 del
DVU3023

Homology

Orthologues Paralogues

Functions

COG
(T) COG2204 | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains

Essentiality

WT.MOLS4 WT.MOLS4_NO3 WT.MOYLS4.1 WT.MOYLS4.2
0.55 0.01 0.35 0.22

Product Synonyms

Product (LegacyBRC) Product (RefSeq)

Operon

Refseq

GI Number Accession Blast Conserved Domains
46581426 YP_012234.1 Run

GO Terms

String Network

Link to STRINGS STRINGS Network
DVU3023

Add comment

Log in to post comments