Desulfovibrio vulgaris Hildenborough Module 85 Residual: 0.44 | Syntrophy Portal

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Summary

Residual: 0.44 Score: -47.2713 version: dvh_cmonkey_11_Mar_02

Members

DVU0430 Ech hydrogenase, subunit EchE, putative Details for DVU0430 - Ech hydrogenase, subunit EchE, putative GO Terms: GO:0051287, GO:0008901, GO:0016151, GO:0016651, GO:0048038 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0430 Tuberculist Genomic Region	DVU2768 ComF family protein Details for DVU2768 - ComF family protein GO Terms: GO:0009116, GO:0016740 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2768 Tuberculist Genomic Region
DVU0497 Uncharacterized protein Details for DVU0497 - Uncharacterized protein GO Terms: GO:0051536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0497 Tuberculist Genomic Region	DVU3362 Uncharacterized protein Details for DVU3362 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3362 Tuberculist Genomic Region
DVU0610 Uncharacterized protein Details for DVU0610 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0610 Tuberculist Genomic Region	DVUA0087 Histidine kinase Details for DVUA0087 - Histidine kinase GO Terms: GO:0005524, GO:0016020, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0087 Tuberculist Genomic Region
DVU1080 Iron-sulfur cluster-binding protein Details for DVU1080 - Iron-sulfur cluster-binding protein GO Terms: GO:0051539, GO:0020037, GO:0046872, GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1080 Tuberculist Genomic Region	DVU1870 Cyclase, putative Details for DVU1870 - Cyclase, putative GO Terms: GO:0004061, GO:0019441 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1870 Tuberculist Genomic Region
DVU1979 ABC transporter, ATP-binding protein Details for DVU1979 - ABC transporter, ATP-binding protein GO Terms: GO:0005524, GO:0016887 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1979 Tuberculist Genomic Region	DVU1982 ATP-dependent RNA helicase RhlE Details for DVU1982 - ATP-dependent RNA helicase RhlE GO Terms: GO:0005524, GO:0004386, GO:0003676 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1982 Tuberculist Genomic Region
DVU2136 Uncharacterized protein Details for DVU2136 - Uncharacterized protein GO Terms: GO:0016020 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2136 Tuberculist Genomic Region	DVU2116 Pilin, putative Details for DVU2116 - Pilin, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2116 Tuberculist Genomic Region
DVU2196 Uncharacterized protein Details for DVU2196 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2196 Tuberculist Genomic Region	DVU3078 Uncharacterized protein Details for DVU3078 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3078 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 240 Motif 2:

e-value: 3900

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1063 Transcriptional regulatory protein	up-regulates	0.22	DVU1063
DVU2588 DNA-binding response regulator	up-regulates	0.13	DVU2588
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.15	DVU2832
DVU3142 Sigma-54 dependent transcriptional regulator	up-regulates	0.23	DVU3142

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016811	hydrolase activity, acting on carbon-nit...	4	0.02	1	0.0217
MF	GO:0016810	hydrolase activity, acting on carbon-nit...	9	0.05	1	0.0483

Essentiality

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