Desulfovibrio vulgaris Hildenborough Module 125 Residual: 0.41

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Summary

Residual: 0.41 Score: -73.8701 version: dvh_cmonkey_11_Mar_02

Members

DVU0310 Flagellum-specific ATP synthase FliI

Details for DVU0310 - Flagellum-specific ATP synthase FliI

GO Terms: GO:0005524, GO:0016887, GO:0009058, GO:0005737, GO:0030254, GO:0030257

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0310

Tuberculist Genomic Region

DVU0517 Peptidase, M23/M37 family

Details for DVU0517 - Peptidase, M23/M37 family

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0517

Tuberculist Genomic Region

DVU0311 Flagellar assembly protein FliH, putative

Details for DVU0311 - Flagellar assembly protein FliH, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0311

Tuberculist Genomic Region

DVU0519 Flagellar hook-associated protein FlgK, putative

Details for DVU0519 - Flagellar hook-associated protein FlgK, putative

GO Terms: GO:0044780, GO:0009424, GO:0071973, GO:0005198

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0519

Tuberculist Genomic Region

DVU0312 Flagellar motor switch protein FliG

Details for DVU0312 - Flagellar motor switch protein FliG

GO Terms: GO:0009288, GO:0071973, GO:0006935, GO:0003774

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0312

Tuberculist Genomic Region

DVU0913 Uncharacterized protein

Details for DVU0913 - Uncharacterized protein

GO Terms: GO:0009288, GO:0071973, GO:0006935, GO:0016020, GO:0003774

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0913

Tuberculist Genomic Region

DVU0313 Flagellar M-ring protein

Details for DVU0313 - Flagellar M-ring protein

GO Terms: GO:0009431, GO:0071973, GO:0003774

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0313

Tuberculist Genomic Region

DVU2232 Uncharacterized protein

Details for DVU2232 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2232

Tuberculist Genomic Region

DVU0314 Flagellar hook-basal body complex protein FliE

Details for DVU0314 - Flagellar hook-basal body complex protein FliE

GO Terms: GO:0009425, GO:0071973, GO:0003774, GO:0005198

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0314

Tuberculist Genomic Region

DVU3003 Radical SAM domain protein

Details for DVU3003 - Radical SAM domain protein

GO Terms: GO:0051539, GO:0003824, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3003

Tuberculist Genomic Region

DVU0315 Flagellar basal-body rod protein FlgC

Details for DVU0315 - Flagellar basal-body rod protein FlgC

GO Terms: GO:0030694, GO:0071973

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0315

Tuberculist Genomic Region

DVU3018 Radical SAM domain protein

Details for DVU3018 - Radical SAM domain protein

GO Terms: GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3018

Tuberculist Genomic Region

DVU0512 Flagellar basal-body rod protein, putative

Details for DVU0512 - Flagellar basal-body rod protein, putative

GO Terms: GO:0009288, GO:0044781, GO:0071973

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0512

Tuberculist Genomic Region

DVU3019 Radical SAM/B12 binding domain protein

Details for DVU3019 - Radical SAM/B12 binding domain protein

GO Terms: GO:0003824, GO:0031419, GO:0051536, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3019

Tuberculist Genomic Region

DVU0513 Flagellar basal-body rod protein FlgG

Details for DVU0513 - Flagellar basal-body rod protein FlgG

GO Terms: GO:0009426, GO:0044781, GO:0071973

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0513

Tuberculist Genomic Region

DVU3020 Uncharacterized protein

Details for DVU3020 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3020

Tuberculist Genomic Region

DVU0515 Flagellar L-ring protein

Details for DVU0515 - Flagellar L-ring protein

GO Terms: GO:0009427, GO:0071973, GO:0009279, GO:0003774

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0515

Tuberculist Genomic Region

DVU3004 Radical SAM domain protein

Details for DVU3004 - Radical SAM domain protein

GO Terms: GO:0051539, GO:0003824, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3004

Tuberculist Genomic Region

DVU0516 Flagellar P-ring protein

Details for DVU0516 - Flagellar P-ring protein

GO Terms: GO:0009428, GO:0071973, GO:0030288, GO:0005198

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0516

Tuberculist Genomic Region

Displaying 1 - 19 of 19

Motifs

Motif 1: e-value: 21 e-value: 4.9

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1] up-regulates 0.10

Acetate
[field_regulator_taxonomy_regulat_1] down-regulates -0.11

Co-culture Ancestor

DVU0063

Transcriptional regulator, MarR family
 down-regulates -0.11

DVU0063

DVU0594

Chromosome initiation inhibitor
 down-regulates -0.14

DVU0594

DVU0606

Transcriptional regulator, ArsR family/methyltransferase, UbiE/COQ5 family
 down-regulates -0.12

DVU0606

DVU0942

Transcriptional regulator, Fur family
 down-regulates -0.14

DVU0942

DVU1144

Transcriptional regulator, Cro/CI family
 up-regulates 0.10

DVU1144

DVU1584

RNA polymerase sigma factor
 down-regulates -0.11

DVU1584

DVU1744

DNA-binding protein
 down-regulates -0.11

DVU1744

DVU2097

Transcriptional regulator, putative
 down-regulates -0.10

DVU2097

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006996 organelle organization 6 0.02 1 0.0160
BP GO:0030031 cell projection assembly 6 0.02 1 0.0160
BP GO:0044780 bacterial-type flagellum assembly 6 0.02 1 0.0160
BP GO:0070925 organelle assembly 6 0.02 1 0.0160
BP GO:0030030 cell projection organization 7 0.02 1 0.0190
BP GO:0044781 bacterial-type flagellum organization 7 0.02 1 0.0190
BP GO:0022607 cellular component assembly 18 0.05 1 0.0490
Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0005623 cell 145 3.32 9 0.0001
CC GO:0044464 cell part 145 3.32 9 0.0001
CC GO:0005622 intracellular 104 2.38 6 0.0125
CC GO:0044424 intracellular part 104 2.38 6 0.0125
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0051539 4 iron, 4 sulfur cluster binding 61 0.24 2 0.0200

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