Desulfovibrio vulgaris Hildenborough Module 247 Residual: 0.49

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Summary

Residual: 0.49 Score: -29.8901 version: dvh_cmonkey_11_Mar_02

Members

DVU0026 Uncharacterized protein

Details for DVU0026 - Uncharacterized protein

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0026

Tuberculist Genomic Region

DVU0130 Phosphoglycolate phosphatase, putative

Details for DVU0130 - Phosphoglycolate phosphatase, putative

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0130

Tuberculist Genomic Region

DVU0094 Methyl-accepting chemotaxis protein

Details for DVU0094 - Methyl-accepting chemotaxis protein

GO Terms: GO:0016021, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0094

Tuberculist Genomic Region

DVU0360 Acetolactate synthase

Details for DVU0360 - Acetolactate synthase

GO Terms: GO:0003984, GO:0050660, GO:0009097, GO:0000287, GO:0030976, GO:0009099

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0360

Tuberculist Genomic Region

DVU0100 TonB-dependent receptor

Details for DVU0100 - TonB-dependent receptor

GO Terms: GO:0016020, GO:0004872, GO:0006810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0100

Tuberculist Genomic Region

DVU0533 Protein DVU_0533

Details for DVU0533 - Protein DVU_0533

GO Terms: GO:0016021, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0533

Tuberculist Genomic Region

DVU0103 Cation ABC transporter, ATP-binding protein, putative

Details for DVU0103 - Cation ABC transporter, ATP-binding protein, putative

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0103

Tuberculist Genomic Region

DVU0534 Protein DVU_0534

Details for DVU0534 - Protein DVU_0534

GO Terms: GO:0016021, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0534

Tuberculist Genomic Region

DVU0233 Uncharacterized protein

Details for DVU0233 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0233

Tuberculist Genomic Region

DVU0588 Formate dehydrogenase, beta subunit, putative

Details for DVU0588 - Formate dehydrogenase, beta subunit, putative

GO Terms: GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0588

Tuberculist Genomic Region

DVU0446 Sodium/solute symporter family protein

Details for DVU0446 - Sodium/solute symporter family protein

GO Terms: GO:0016021, GO:0005886, GO:0055085, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0446

Tuberculist Genomic Region

DVU0593 L-lysine exporter, putative

Details for DVU0593 - L-lysine exporter, putative

GO Terms: GO:0006865, GO:0016021, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0593

Tuberculist Genomic Region

DVU0791 Methylated-DNA--protein-cysteine methyltransferase, DNA-binding domain protein

Details for DVU0791 - Methylated-DNA--protein-cysteine methyltransferase, DNA-binding domain protein

GO Terms: GO:0003677, GO:0006281, GO:0003908

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0791

Tuberculist Genomic Region

DVU0678 Uncharacterized protein

Details for DVU0678 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0678

Tuberculist Genomic Region

DVU2687 Uncharacterized protein

Details for DVU2687 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2687

Tuberculist Genomic Region

DVU2090 EF hand domain protein

Details for DVU2090 - EF hand domain protein

GO Terms: GO:0005509

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2090

Tuberculist Genomic Region

DVU2849 Tail fiber protein, putative

Details for DVU2849 - Tail fiber protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2849

Tuberculist Genomic Region

DVU2570 GGDEF domain/HAMP domain protein

Details for DVU2570 - GGDEF domain/HAMP domain protein

GO Terms: GO:0016021, GO:0004871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2570

Tuberculist Genomic Region

DVU2999 Methionyl-tRNA formyltransferase, putative

Details for DVU2999 - Methionyl-tRNA formyltransferase, putative

GO Terms: GO:0009058, GO:0016742

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2999

Tuberculist Genomic Region

DVU2730 Tail fiber protein, putative

Details for DVU2730 - Tail fiber protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2730

Tuberculist Genomic Region

DVU3244 Uncharacterized protein

Details for DVU3244 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3244

Tuberculist Genomic Region

DVU2829 Uncharacterized protein

Details for DVU2829 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2829

Tuberculist Genomic Region

DVU3372 Uncharacterized protein

Details for DVU3372 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3372

Tuberculist Genomic Region

DVU3384 Zinc resistance-associated protein homolog

Details for DVU3384 - Zinc resistance-associated protein homolog

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3384

Tuberculist Genomic Region

DVU0049 OmpA family protein

Details for DVU0049 - OmpA family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0049

Tuberculist Genomic Region

DVUA0036 TPR domain protein

Details for DVUA0036 - TPR domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0036

Tuberculist Genomic Region

DVU0101 Methlytransferase, UbiE/COQ5 family

Details for DVU0101 - Methlytransferase, UbiE/COQ5 family

GO Terms: GO:0008168

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0101

Tuberculist Genomic Region

DVUA0089 Uncharacterized protein

Details for DVUA0089 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVUA0089

Tuberculist Genomic Region

Displaying 1 - 28 of 28

Motifs

Motif 1: e-value: 0.0066 e-value: 350

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0596

DNA-binding response regulator LytR
 up-regulates 0.16

DVU0596

DVU1402

Transcriptional regulator, LysR family
 up-regulates 0.17

DVU1402

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006820 anion transport 8 0.04 1 0.0430
BP GO:0006865 amino acid transport 8 0.04 1 0.0430
BP GO:0015711 organic anion transport 8 0.04 1 0.0430
BP GO:0015849 organic acid transport 8 0.04 1 0.0430
BP GO:0046942 carboxylic acid transport 8 0.04 1 0.0430
BP GO:0071705 nitrogen compound transport 8 0.04 1 0.0430
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005509 calcium ion binding 3 0.02 1 0.0190
MF GO:0003984 acetolactate synthase activity 4 0.02 1 0.0250
MF GO:0016744 transferase activity, transferring aldeh... 4 0.02 1 0.0250

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