Desulfovibrio vulgaris Hildenborough Module 280 Residual: 0.46 | Syntrophy Portal

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Summary

Residual: 0.46 Score: -44.2058 version: dvh_cmonkey_11_Mar_02

Members

DVU0172 Iron-sulfur cluster-binding protein Details for DVU0172 - Iron-sulfur cluster-binding protein GO Terms: GO:0051536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0172 Tuberculist Genomic Region	DVU2807 Biopolymer transport protein, ExbD/TolR family Details for DVU2807 - Biopolymer transport protein, ExbD/TolR family GO Terms: GO:0016021, GO:0015031, GO:0005215 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2807 Tuberculist Genomic Region
DVU0173 Thiosulfate reductase, putative Details for DVU0173 - Thiosulfate reductase, putative GO Terms: GO:0051539, GO:0030151, GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0173 Tuberculist Genomic Region	DVU3290 Conserved domain protein Details for DVU3290 - Conserved domain protein GO Terms: GO:0008152 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3290 Tuberculist Genomic Region
DVU0186 Uncharacterized protein Details for DVU0186 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0186 Tuberculist Genomic Region	DVU3291 Glutamate synthase, iron-sulfur cluster-binding subunit, putative Details for DVU3291 - Glutamate synthase, iron-sulfur cluster-binding subunit, putative GO Terms: GO:0006537, GO:0015930, GO:0051536 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3291 Tuberculist Genomic Region
DVU1169 Methyl-accepting chemotaxis protein Details for DVU1169 - Methyl-accepting chemotaxis protein GO Terms: GO:0006935, GO:0016021, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1169 Tuberculist Genomic Region	DVU3312 Uncharacterized protein Details for DVU3312 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3312 Tuberculist Genomic Region
DVU2110 L-lactate permease Details for DVU2110 - L-lactate permease GO Terms: GO:0005887, GO:0015129 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2110 Tuberculist Genomic Region	DVU0250 Uncharacterized protein Details for DVU0250 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0250 Tuberculist Genomic Region
DVU2560 Conserved domain protein Details for DVU2560 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2560 Tuberculist Genomic Region	DVU0251 Membrane protein, putative Details for DVU0251 - Membrane protein, putative GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0251 Tuberculist Genomic Region
DVU2562 Acyl carrier protein, putative Details for DVU2562 - Acyl carrier protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2562 Tuberculist Genomic Region	DVU0308 Membrane protein, putative Details for DVU0308 - Membrane protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0308 Tuberculist Genomic Region
DVU2563 Beta-ketoacyl synthase, putative Details for DVU2563 - Beta-ketoacyl synthase, putative GO Terms: GO:0016740 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2563 Tuberculist Genomic Region	DVU0309 Transcriptional regulator, LysR family Details for DVU0309 - Transcriptional regulator, LysR family GO Terms: GO:0003677, GO:0003700, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0309 Tuberculist Genomic Region
DVU2802 Transcriptional regulator, GntR family Details for DVU2802 - Transcriptional regulator, GntR family GO Terms: GO:0003677, GO:0003700, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2802 Tuberculist Genomic Region	DVU2510 Penicillin-binding protein Details for DVU2510 - Penicillin-binding protein GO Terms: GO:0008658 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2510 Tuberculist Genomic Region
DVU2803 Membrane protein, putative Details for DVU2803 - Membrane protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2803 Tuberculist Genomic Region	DVU2804 Metallo-beta-lactamase family protein Details for DVU2804 - Metallo-beta-lactamase family protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2804 Tuberculist Genomic Region
DVU2805 Cobalamin synthesis protein/P47K family Details for DVU2805 - Cobalamin synthesis protein/P47K family GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2805 Tuberculist Genomic Region	DVU3292 Pyridine nucleotide-disulfide oxidoreductase Details for DVU3292 - Pyridine nucleotide-disulfide oxidoreductase GO Terms: GO:0050660, GO:0051536, GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3292 Tuberculist Genomic Region
DVU2806 MotA/TolQ/ExbB proton channel family protein Details for DVU2806 - MotA/TolQ/ExbB proton channel family protein GO Terms: GO:0016021, GO:0008565 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2806 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 23 Motif 2:

e-value: 110

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0006537	glutamate biosynthetic process	3	0.02	1	0.0240
BP	GO:0043650	dicarboxylic acid biosynthetic process	3	0.02	1	0.0240
BP	GO:0006536	glutamate metabolic process	4	0.03	1	0.0320
BP	GO:0043648	dicarboxylic acid metabolic process	4	0.03	1	0.0320
BP	GO:0009084	glutamine family amino acid biosynthetic...	6	0.05	1	0.0480

Category: CC
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
CC	GO:0016021	integral component of membrane	184	1.87	4	0.0470
CC	GO:0031224	intrinsic component of membrane	184	1.87	4	0.0470

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0031406	carboxylic acid binding	6	0.03	1	0.0320
MF	GO:0043177	organic acid binding	6	0.03	1	0.0320

Essentiality

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