Desulfovibrio vulgaris Hildenborough Module 300 Residual: 0.37

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Summary

Residual: 0.37 Score: -60.4605 version: dvh_cmonkey_11_Mar_02

Members

DVU0788 Cell shape-determining protein MreC

Details for DVU0788 - Cell shape-determining protein MreC

GO Terms: GO:0008360

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0788

Tuberculist Genomic Region

DVU1076 Putative membrane protein insertion efficiency factor

Details for DVU1076 - Putative membrane protein insertion efficiency factor

GO Terms: GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1076

Tuberculist Genomic Region

DVU1650 Uncharacterized protein

Details for DVU1650 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1650

Tuberculist Genomic Region

DVU1246 Membrane protein, putative

Details for DVU1246 - Membrane protein, putative

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1246

Tuberculist Genomic Region

DVU2375 Lipoprotein releasing system, permease protein

Details for DVU2375 - Lipoprotein releasing system, permease protein

GO Terms: GO:0016021, GO:0042954, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2375

Tuberculist Genomic Region

DVU1840 tRNA N6-adenosine threonylcarbamoyltransferase

Details for DVU1840 - tRNA N6-adenosine threonylcarbamoyltransferase

GO Terms: GO:0005737, GO:0005506, GO:0004222, GO:0070526, GO:0016747

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1840

Tuberculist Genomic Region

DVU0106 Glutamine ABC transporter, permease protein

Details for DVU0106 - Glutamine ABC transporter, permease protein

GO Terms: GO:0016021, GO:0005886, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0106

Tuberculist Genomic Region

DVU1843 Uncharacterized protein

Details for DVU1843 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1843

Tuberculist Genomic Region

DVU0280 Glycosyl transferase, group 1 family protein

Details for DVU0280 - Glycosyl transferase, group 1 family protein

GO Terms: GO:0009058, GO:0016740

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0280

Tuberculist Genomic Region

DVU2371 N-acetylmuramoyl-L-alanine amidase, putative

Details for DVU2371 - N-acetylmuramoyl-L-alanine amidase, putative

GO Terms: GO:0008745, GO:0009253

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2371

Tuberculist Genomic Region

DVU0511 Ribosome maturation factor RimP

Details for DVU0511 - Ribosome maturation factor RimP

GO Terms: GO:0005737, GO:0042274

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0511

Tuberculist Genomic Region

DVU3161 ABC transporter, ATP-binding protein

Details for DVU3161 - ABC transporter, ATP-binding protein

GO Terms: GO:0005524, GO:0043190, GO:0016887, GO:0016820

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3161

Tuberculist Genomic Region

DVU1050 Cytochrome c-type biogenesis protein CcmF

Details for DVU1050 - Cytochrome c-type biogenesis protein CcmF

GO Terms: GO:0017004, GO:0020037, GO:0015232, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1050

Tuberculist Genomic Region

DVU3255 Transcriptional regulator, CopG family

Details for DVU3255 - Transcriptional regulator, CopG family

GO Terms: GO:0006355

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3255

Tuberculist Genomic Region

Displaying 1 - 14 of 14

Motifs

Motif 1: e-value: 40 e-value: 1200

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0539

Sigma-54 dependent DNA-binding response regulator
 down-regulates -0.14

DVU0539

DVU1754

Uncharacterized protein
 down-regulates -0.16

DVU1754

DVU3142

Sigma-54 dependent transcriptional regulator
 down-regulates -0.47

DVU3142

DVU3313

Transcriptional regulator, LysR family
 up-regulates 0.29

DVU3313

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0016043 cellular component organization 28 0.30 2 0.0300
BP GO:0000902 cell morphogenesis 3 0.03 1 0.0320
BP GO:0009653 anatomical structure morphogenesis 3 0.03 1 0.0320
BP GO:0032502 developmental process 3 0.03 1 0.0320
BP GO:0032989 cellular component morphogenesis 3 0.03 1 0.0320
BP GO:0044767 single-organism developmental process 3 0.03 1 0.0320
BP GO:0048856 anatomical structure development 3 0.03 1 0.0320
BP GO:0048869 cellular developmental process 3 0.03 1 0.0320
BP GO:0071840 cellular component organization or bioge... 31 0.34 2 0.0370
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016811 hydrolase activity, acting on carbon-nit... 4 0.01 1 0.0062
MF GO:0016810 hydrolase activity, acting on carbon-nit... 9 0.01 1 0.0140

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