Desulfovibrio vulgaris Hildenborough Module 323 Residual: 0.49

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Summary

Residual: 0.49 Score: -46.9817 version: dvh_cmonkey_11_Mar_02

Members

DVU1025 Uracil phosphoribosyltransferase

Details for DVU1025 - Uracil phosphoribosyltransferase

GO Terms: GO:0005525, GO:0044206, GO:0000287, GO:0004845, GO:0006223

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1025

Tuberculist Genomic Region

DVU1616 Uncharacterized protein

Details for DVU1616 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1616

Tuberculist Genomic Region

DVU0064 Uncharacterized protein

Details for DVU0064 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0064

Tuberculist Genomic Region

DVU1617 Nitroreductase family protein

Details for DVU1617 - Nitroreductase family protein

GO Terms: GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1617

Tuberculist Genomic Region

DVU0732 Valine--tRNA ligase

Details for DVU0732 - Valine--tRNA ligase

GO Terms: GO:0005524, GO:0002161, GO:0005737, GO:0004832, GO:0006438

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0732

Tuberculist Genomic Region

DVU1618 Ribosomal silencing factor RsfS

Details for DVU1618 - Ribosomal silencing factor RsfS

GO Terms: GO:0005737, GO:0042256, GO:0090071, GO:0017148

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1618

Tuberculist Genomic Region

DVU1089 Alanine--tRNA ligase

Details for DVU1089 - Alanine--tRNA ligase

GO Terms: GO:0005524, GO:0004813, GO:0006419, GO:0005737, GO:0000049, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1089

Tuberculist Genomic Region

DVU1619 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

Details for DVU1619 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase

GO Terms: GO:0046537, GO:0005737, GO:0006007, GO:0006096, GO:0030145

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1619

Tuberculist Genomic Region

DVU1090 Protein RecA

Details for DVU1090 - Protein RecA

GO Terms: GO:0005524, GO:0006310, GO:0006281, GO:0008094, GO:0009432, GO:0005737, GO:0003684, GO:0003697

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1090

Tuberculist Genomic Region

DVU1620 Uncharacterized protein

Details for DVU1620 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1620

Tuberculist Genomic Region

DVU1205 Acyl carrier protein

Details for DVU1205 - Acyl carrier protein

GO Terms: GO:0000036, GO:0005737

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1205

Tuberculist Genomic Region

DVU1819 Protein translocase subunit SecD

Details for DVU1819 - Protein translocase subunit SecD

GO Terms: GO:0015450, GO:0016021, GO:0005622, GO:0065002, GO:0005886, GO:0006605, GO:0043952

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1819

Tuberculist Genomic Region

DVU1206 3-oxoacyl-

Details for DVU1206 - 3-oxoacyl-

GO Terms: GO:0004316, GO:0051287, GO:0006633

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1206

Tuberculist Genomic Region

DVU2586 ABC transporter, ATP-binding protein

Details for DVU2586 - ABC transporter, ATP-binding protein

GO Terms: GO:0005524, GO:0016887

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2586

Tuberculist Genomic Region

DVU1220 Nitroreductase family protein

Details for DVU1220 - Nitroreductase family protein

GO Terms: GO:0051536, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1220

Tuberculist Genomic Region

DVU2890 Conserved domain protein

Details for DVU2890 - Conserved domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2890

Tuberculist Genomic Region

DVU1293 Uncharacterized protein

Details for DVU1293 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1293

Tuberculist Genomic Region

DVU3065 AMP-binding enzyme family protein

Details for DVU3065 - AMP-binding enzyme family protein

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU3065

Tuberculist Genomic Region

DVU1615 Phenylacetate-coenzyme A ligase

Details for DVU1615 - Phenylacetate-coenzyme A ligase

GO Terms: GO:0000166, GO:0010124, GO:0047475

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1615

Tuberculist Genomic Region

Displaying 1 - 19 of 19

Motifs

Motif 1: e-value: 14 e-value: 19

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU1517

Transcriptional regulator cII, putative
 down-regulates -0.13

DVU1517

DVU2423

Transcriptional regulator, putative
 down-regulates -0.29

DVU2423

DVU2547

Transcriptional regulator, putative
 down-regulates -0.15

DVU2547

DVU2588

DNA-binding response regulator
 down-regulates -0.17

DVU2588

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016866 intramolecular transferase activity 3 0.03 1 0.0300
MF GO:0004312 fatty acid synthase activity 4 0.04 1 0.0400
MF GO:0008320 protein transmembrane transporter activi... 4 0.04 1 0.0400
MF GO:0015450 P-P-bond-hydrolysis-driven protein trans... 4 0.04 1 0.0400
MF GO:0022884 macromolecule transmembrane transporter ... 4 0.04 1 0.0400
MF GO:0008565 protein transporter activity 5 0.05 1 0.0500
MF GO:0015399 primary active transmembrane transporter... 5 0.05 1 0.0500
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane... 5 0.05 1 0.0500

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