Desulfovibrio vulgaris Hildenborough Module 340 Residual: 0.49 | Syntrophy Portal

×

Error message

Unable to create CTools CSS cache directory. Check the permissions on your files directory.
Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.49 Score: -61.2636 version: dvh_cmonkey_11_Mar_02

Members

DVU0190 Uncharacterized protein Details for DVU0190 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0190 Tuberculist Genomic Region	DVUA0034 Conserved domain protein Details for DVUA0034 - Conserved domain protein GO Terms: GO:0016491 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0034 Tuberculist Genomic Region
DVU0191 Uncharacterized protein Details for DVU0191 - Uncharacterized protein GO Terms: GO:0003677, GO:0003896, GO:0004386, GO:0008270 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0191 Tuberculist Genomic Region	DVUA0038 Capsular polysaccharide transport protein Details for DVUA0038 - Capsular polysaccharide transport protein GO Terms: GO:0016020, GO:0015159 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0038 Tuberculist Genomic Region
DVU0192 Methyltransferase Details for DVU0192 - Methyltransferase GO Terms: GO:0003677, GO:0006306, GO:0008170 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0192 Tuberculist Genomic Region	DVUA0054 Glycosyl transferase, group 1 family protein Details for DVUA0054 - Glycosyl transferase, group 1 family protein GO Terms: GO:0009058, GO:0016740 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0054 Tuberculist Genomic Region
DVU0193 Uncharacterized protein Details for DVU0193 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0193 Tuberculist Genomic Region	DVUA0058 BNR/Asp-box repeat protein Details for DVUA0058 - BNR/Asp-box repeat protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0058 Tuberculist Genomic Region
DVU1724 Phage uncharacterized protein, putative Details for DVU1724 - Phage uncharacterized protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1724 Tuberculist Genomic Region	DVUA0060 Membrane protein, putative Details for DVUA0060 - Membrane protein, putative GO Terms: GO:0016020, GO:0016747 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0060 Tuberculist Genomic Region
DVU2854 Tail protein, putative Details for DVU2854 - Tail protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2854 Tuberculist Genomic Region	DVUA0139 Outer membrane autotransporter barrel domain protein Details for DVUA0139 - Outer membrane autotransporter barrel domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0139 Tuberculist Genomic Region
DVU2878 Methyltransferase Details for DVU2878 - Methyltransferase GO Terms: GO:0003677, GO:0006306, GO:0008170 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2878 Tuberculist Genomic Region	DVUA0140 Uncharacterized protein Details for DVUA0140 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0140 Tuberculist Genomic Region
DVU2879 Uncharacterized protein Details for DVU2879 - Uncharacterized protein GO Terms: GO:0003677, GO:0003896, GO:0004386, GO:0008270 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2879 Tuberculist Genomic Region	DVUA0152 Conserved domain protein Details for DVUA0152 - Conserved domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVUA0152 Tuberculist Genomic Region
DVU2880 Uncharacterized protein Details for DVU2880 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2880 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 0.00000000000034 Motif 2:

e-value: 0.000000000000069

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU1063 Transcriptional regulatory protein	up-regulates	0.27	DVU1063
DVU1754 Uncharacterized protein	up-regulates	0.29	DVU1754
DVU1967 Transcriptional regulator, rrf2 protein, putative	up-regulates	0.16	DVU1967

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0003677	DNA binding	159	0.62	4	0.0010
MF	GO:0003676	nucleic acid binding	222	0.87	4	0.0038

Essentiality

Comments

Log in to post comments