Methanococcus maripaludis S2 Module 14 Residual: 0.35

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Summary

Residual: 0.35 Score: -11.4388 version: mmp_cmonkey_11_Oct_11

Members

MMP0021 conserved hypothetical archaeal protein (NCBI)

Details for MMP0021 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0021

Tuberculist Genomic Region

MMP1262 conserved hypothetical protein (NCBI)

Details for MMP1262 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1262

Tuberculist Genomic Region

MMP0056 FO synthase, subunit CofH (NCBI)

Details for MMP0056 - FO synthase, subunit CofH (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0056

Tuberculist Genomic Region

MMP1348 Conserved hypothetical protein (NCBI)

Details for MMP1348 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0009231, GO:0006304, GO:0003676, GO:0050661, GO:0008703

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1348

Tuberculist Genomic Region

MMP0099 General substrate transporter (NCBI)

Details for MMP0099 - General substrate transporter (NCBI)

GO Terms: GO:0015904, GO:0046677, GO:0016021, GO:0015520

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0099

Tuberculist Genomic Region

MMP1373 conserved hypothetical archaeal protein (NCBI)

Details for MMP1373 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0005524, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1373

Tuberculist Genomic Region

MMP0124 Conserved hypothetical protein (NCBI)

Details for MMP0124 - Conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0124

Tuberculist Genomic Region

MMP1438

Details for MMP1438 -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1438

Tuberculist Genomic Region

MMP0125 conserved archaeal fibrillarin homolog (NCBI)

Details for MMP0125 - conserved archaeal fibrillarin homolog (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0125

Tuberculist Genomic Region

MMP1492 Orotate phosphoribosyltransferase (NCBI)

Details for MMP1492 - Orotate phosphoribosyltransferase (NCBI)

GO Terms: GO:0006355, GO:0009116, GO:0006221, GO:0004588, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1492

Tuberculist Genomic Region

MMP0126 Biotin synthetase (NCBI)

Details for MMP0126 - Biotin synthetase (NCBI)

GO Terms: GO:0008152, GO:0051536, GO:0004076

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0126

Tuberculist Genomic Region

MMP1499 conserved hypothetical archaeal protein (NCBI)

Details for MMP1499 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1499

Tuberculist Genomic Region

MMP0152 Cation transporter (NCBI)

Details for MMP0152 - Cation transporter (NCBI)

GO Terms: GO:0015746, GO:0016021, GO:0015137

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0152

Tuberculist Genomic Region

MMP0019 hypothetical protein (NCBI)

Details for MMP0019 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0019

Tuberculist Genomic Region

MMP0428 vanadium nitrogenase-associated related protein N (NCBI)

Details for MMP0428 - vanadium nitrogenase-associated related protein N (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0428

Tuberculist Genomic Region

MMP0222 conserved hypothetical archaeal protein (NCBI)

Details for MMP0222 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0222

Tuberculist Genomic Region

MMP0895 TPR repeat (NCBI)

Details for MMP0895 - TPR repeat (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0895

Tuberculist Genomic Region

MMP1024 MCM family related protein (NCBI)

Details for MMP1024 - MCM family related protein (NCBI)

GO Terms: GO:0006270, GO:0005524, GO:0008094, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1024

Tuberculist Genomic Region

MMP0905 conserved hypothetical protein (NCBI)

Details for MMP0905 - conserved hypothetical protein (NCBI)

GO Terms: GO:0000287, GO:0030955

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0905

Tuberculist Genomic Region

MMP1117 conserved hypothetical protein (NCBI)

Details for MMP1117 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1117

Tuberculist Genomic Region

MMP0907 predicted archaeal transcriptional regulator (NCBI)

Details for MMP0907 - predicted archaeal transcriptional regulator (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0907

Tuberculist Genomic Region

MMP1287 Protein of unknown function UPF0058 (NCBI)

Details for MMP1287 - Protein of unknown function UPF0058 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1287

Tuberculist Genomic Region

MMP1048 conserved hypothetical protein (NCBI)

Details for MMP1048 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1048

Tuberculist Genomic Region

MMP1350 conserved hypothetical protein (NCBI)

Details for MMP1350 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0046872, GO:0051536, GO:0003824, GO:0031419

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1350

Tuberculist Genomic Region

MMP1080 Glycosyl transferase, group 1 (NCBI)

Details for MMP1080 - Glycosyl transferase, group 1 (NCBI)

GO Terms: GO:0009058

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1080

Tuberculist Genomic Region

MMP1491 Chlorohydrolase (NCBI)

Details for MMP1491 - Chlorohydrolase (NCBI)

GO Terms: GO:0016810

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1491

Tuberculist Genomic Region

MMP1089 Polysaccharide biosynthesis protein (NCBI)

Details for MMP1089 - Polysaccharide biosynthesis protein (NCBI)

GO Terms: GO:0000271, GO:0006855, GO:0016020, GO:0015238, GO:0015297

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1089

Tuberculist Genomic Region

MMP1521 conserved hypothetical archaeal protein (NCBI)

Details for MMP1521 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1521

Tuberculist Genomic Region

MMP1103 conserved hypothetical protein (NCBI)

Details for MMP1103 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1103

Tuberculist Genomic Region

MMP1587 conserved hypothetical archaeal protein (NCBI)

Details for MMP1587 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0016020, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1587

Tuberculist Genomic Region

MMP1143 TPR repeat (NCBI)

Details for MMP1143 - TPR repeat (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1143

Tuberculist Genomic Region

MMP1648 conserved hypothetical protein (NCBI)

Details for MMP1648 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1648

Tuberculist Genomic Region

MMP1175

Details for MMP1175 -

GO Terms: GO:0008171

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1175

Tuberculist Genomic Region

Displaying 1 - 33 of 33

Motifs

Motif 1: e-value: 7.1 e-value: 29000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0031

conserved hypothetical archeal protein (NCBI)

MMP0637

Transcriptional regulator, ArsR family member (NCBI)
 up-regulates 0.49

MMP0031

MMP0637

MMP0033

LysR family member (NCBI)
 up-regulates 0.43

MMP0033

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009124 nucleoside monophosphate biosynthetic pr... 23 0.24 2 0.0140
BP GO:0009156 ribonucleoside monophosphate biosyntheti... 23 0.24 2 0.0140
BP GO:0009123 nucleoside monophosphate metabolic proce... 24 0.25 2 0.0150
BP GO:0009161 ribonucleoside monophosphate metabolic p... 24 0.25 2 0.0150
BP GO:0009260 ribonucleotide biosynthetic process 25 0.26 2 0.0160
BP GO:0046390 ribose phosphate biosynthetic process 25 0.26 2 0.0160
BP GO:0009259 ribonucleotide metabolic process 26 0.27 2 0.0180
BP GO:0019693 ribose phosphate metabolic process 27 0.28 2 0.0190
BP GO:1901137 carbohydrate derivative biosynthetic pro... 27 0.28 2 0.0190
BP GO:0009165 nucleotide biosynthetic process 28 0.29 2 0.0210
BP GO:1901293 nucleoside phosphate biosynthetic proces... 28 0.29 2 0.0210
BP GO:0006753 nucleoside phosphate metabolic process 31 0.32 2 0.0250
BP GO:0009117 nucleotide metabolic process 31 0.32 2 0.0250
BP GO:1901135 carbohydrate derivative metabolic proces... 34 0.35 2 0.0310
BP GO:0034654 nucleobase-containing compound biosynthe... 35 0.36 2 0.0320
BP GO:0090407 organophosphate biosynthetic process 36 0.38 2 0.0340
BP GO:0055086 nucleobase-containing small molecule met... 37 0.39 2 0.0360
BP GO:0019637 organophosphate metabolic process 41 0.43 2 0.0450
BP GO:0006796 phosphate-containing compound metabolic ... 43 0.45 2 0.0490
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0051539 4 iron, 4 sulfur cluster binding 37 0.48 3 0.0096
MF GO:0051536 iron-sulfur cluster binding 67 0.87 3 0.0480
MF GO:0051540 metal cluster binding 67 0.87 3 0.0480

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