Methanococcus maripaludis S2 Module 67 Residual: 0.38

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Summary

Residual: 0.38 Score: -10.7285 version: mmp_cmonkey_11_Oct_11

Members

MMP0017 conserved hypothetical protein (NCBI)

Details for MMP0017 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0017

Tuberculist Genomic Region

MMP0262 conserved hypothetical protein (NCBI)

Details for MMP0262 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0262

Tuberculist Genomic Region

MMP0204 Conserved hypothetical protein (NCBI)

Details for MMP0204 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0204

Tuberculist Genomic Region

MMP0322 replication factor C, large subunit (NCBI)

Details for MMP0322 - replication factor C, large subunit (NCBI)

GO Terms: GO:0009360, GO:0003887, GO:0005524, GO:0017111

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0322

Tuberculist Genomic Region

MMP0274 hydrogenase expression/formation protein (NCBI)

Details for MMP0274 - hydrogenase expression/formation protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0274

Tuberculist Genomic Region

MMP0446 Nitrogen fixation-related protein (NCBI)

Details for MMP0446 - Nitrogen fixation-related protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0446

Tuberculist Genomic Region

MMP0280 Phosphoribosyl-AMP cyclohydrolase (NCBI)

Details for MMP0280 - Phosphoribosyl-AMP cyclohydrolase (NCBI)

GO Terms: GO:0000105, GO:0004635

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0280

Tuberculist Genomic Region

MMP0488 Low molecular weight phosphotyrosine protein phosphatase (NCBI)

Details for MMP0488 - Low molecular weight phosphotyrosine protein phosphatase (NCBI)

GO Terms: GO:0006470, GO:0004725

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0488

Tuberculist Genomic Region

MMP0648 RNA 3'-terminal phosphate cyclase (NCBI)

Details for MMP0648 - RNA 3'-terminal phosphate cyclase (NCBI)

GO Terms: GO:0006396, GO:0003963

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0648

Tuberculist Genomic Region

MMP0489 conserved hypothetical protein (NCBI)

Details for MMP0489 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0489

Tuberculist Genomic Region

MMP0682 conserved hypothetical protein (NCBI)

Details for MMP0682 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0682

Tuberculist Genomic Region

MMP0617 DNA repair and recombination protein radB (NCBI)

Details for MMP0617 - DNA repair and recombination protein radB (NCBI)

GO Terms: GO:0006281, GO:0006310, GO:0003684, GO:0008094, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0617

Tuberculist Genomic Region

MMP0993 conserved hypothetical helix-turn-helix protein (NCBI)

Details for MMP0993 - conserved hypothetical helix-turn-helix protein (NCBI)

GO Terms: GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0993

Tuberculist Genomic Region

MMP0760 hypothetical protein (NCBI)

Details for MMP0760 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0760

Tuberculist Genomic Region

MMP1346 Basic helix-loop-helix dimerization domain bHLH (NCBI)

Details for MMP1346 - Basic helix-loop-helix dimerization domain bHLH (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1346

Tuberculist Genomic Region

MMP0811 hypothetical protein (NCBI)

Details for MMP0811 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0811

Tuberculist Genomic Region

MMP0035 conserved hypothetical protein (NCBI)

Details for MMP0035 - conserved hypothetical protein (NCBI)

GO Terms: GO:0005524, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0035

Tuberculist Genomic Region

MMP1079 Glycosyl transferase, family 2 (NCBI)

Details for MMP1079 - Glycosyl transferase, family 2 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1079

Tuberculist Genomic Region

MMP0108 ABC-type Iron(III)-binding periplasmic protein precursor (NCBI)

Details for MMP0108 - ABC-type Iron(III)-binding periplasmic protein precursor (NCBI)

GO Terms: GO:0006810, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0108

Tuberculist Genomic Region

MMP1120 ATP-binding protein, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein C-term... (NCBI)

Details for MMP1120 - ATP-binding protein, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Bacterial sensor protein C-term... (NCBI)

GO Terms: GO:0018106, GO:0007165, GO:0016020, GO:0000155, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1120

Tuberculist Genomic Region

MMP0124 Conserved hypothetical protein (NCBI)

Details for MMP0124 - Conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0124

Tuberculist Genomic Region

MMP1123 conserved hypothetical protein (NCBI)

Details for MMP1123 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1123

Tuberculist Genomic Region

MMP0202 conserved hypothetical protein (NCBI)

Details for MMP0202 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0202

Tuberculist Genomic Region

MMP1686 pseudouridine syntase related protein (NCBI)

Details for MMP1686 - pseudouridine syntase related protein (NCBI)

GO Terms: GO:0031119, GO:0003723, GO:0016439

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1686

Tuberculist Genomic Region

MMP0203 conserved hypothetical protein (NCBI)

Details for MMP0203 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0203

Tuberculist Genomic Region

MMP0341 pyruvate carboxylase subunit A (NCBI)

Details for MMP0341 - pyruvate carboxylase subunit A (NCBI)

GO Terms: GO:0008152, GO:0009343, GO:0003989, GO:0004075, GO:0009374, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0341

Tuberculist Genomic Region

MMP0227 Anaerobic Ribonucleoside-triphosphate reductase (NCBI)

Details for MMP0227 - Anaerobic Ribonucleoside-triphosphate reductase (NCBI)

GO Terms: GO:0006260, GO:0005971, GO:0004748, GO:0008998, GO:0005515

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0227

Tuberculist Genomic Region

MMP0994 putative predicted protein (NCBI)

Details for MMP0994 - putative predicted protein (NCBI)

GO Terms: GO:0006885, GO:0016021, GO:0015299

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0994

Tuberculist Genomic Region

Displaying 1 - 28 of 28

Motifs

Motif 1: e-value: 3100 e-value: 17000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0607

Transcriptional repressor of nif and glnA operons (NCBI)

MMP1442

ArsR family transcriptional regulator (NCBI)
 up-regulates 0.18

MMP0607

MMP1442

MMP0031

conserved hypothetical archeal protein (NCBI)

MMP1704

conserved hypothetical archeal protein (NCBI)
 up-regulates 0.15

MMP0031

MMP1704

MMP0031

conserved hypothetical archeal protein (NCBI)

MMP0402

Conserved hypothetical Archael protein (NCBI)
 up-regulates 0.14

MMP0031

MMP0402

MMP1137

Lrp-Like Transcriptional regulatory proteins, AsnC family (NCBI)
 up-regulates 0.14

MMP1137

MMP1210

MMP1704

conserved hypothetical archeal protein (NCBI)
 up-regulates 0.14

MMP1210

MMP1704

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005524 ATP binding 147 2.85 6 0.0480

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