Methanococcus maripaludis S2 Module 76 Residual: 0.23

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Summary

Residual: 0.23 Score: -17.9243 version: mmp_cmonkey_11_Oct_11

Members

MMP0002 L-seryl-tRNA selenium transferase related protein (NCBI)

Details for MMP0002 - L-seryl-tRNA selenium transferase related protein (NCBI)

GO Terms: GO:0001514, GO:0009058, GO:0005737, GO:0016769, GO:0004125, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0002

Tuberculist Genomic Region

MMP1003 Tryptophan synthase, beta chain (NCBI)

Details for MMP1003 - Tryptophan synthase, beta chain (NCBI)

GO Terms: GO:0006568, GO:0004834, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1003

Tuberculist Genomic Region

MMP0054 conserved hypothetical protein (NCBI)

Details for MMP0054 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006479, GO:0008610, GO:0005737, GO:0008825, GO:0008276

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0054

Tuberculist Genomic Region

MMP1004 N-(5'phosphoribosyl)anthranilate isomerase (NCBI)

Details for MMP1004 - N-(5'phosphoribosyl)anthranilate isomerase (NCBI)

GO Terms: GO:0006568, GO:0004640

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1004

Tuberculist Genomic Region

MMP0055 Conserved hypothetical Archael protein (NCBI)

Details for MMP0055 - Conserved hypothetical Archael protein (NCBI)

GO Terms: GO:0003723

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0055

Tuberculist Genomic Region

MMP1005 Anthranilate synthase component II (NCBI)

Details for MMP1005 - Anthranilate synthase component II (NCBI)

GO Terms: GO:0006541, GO:0009058, GO:0005950, GO:0016874, GO:0004049

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1005

Tuberculist Genomic Region

MMP0269 conserved hypothetical protein (NCBI)

Details for MMP0269 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0269

Tuberculist Genomic Region

MMP1006 Anthranilate synthase component I (NCBI)

Details for MMP1006 - Anthranilate synthase component I (NCBI)

GO Terms: GO:0000162, GO:0005950, GO:0004049

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1006

Tuberculist Genomic Region

MMP0527 conserved hypothetical archaeal protein (NCBI)

Details for MMP0527 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0527

Tuberculist Genomic Region

MMP1007 Anthranilate phosphoribosyltransferase (NCBI)

Details for MMP1007 - Anthranilate phosphoribosyltransferase (NCBI)

GO Terms: GO:0000162, GO:0004048

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1007

Tuberculist Genomic Region

MMP0630 ferrous iron transporter (GTP-binding) (NCBI)

Details for MMP0630 - ferrous iron transporter (GTP-binding) (NCBI)

GO Terms: GO:0015684, GO:0005622, GO:0016021, GO:0009276, GO:0001882, GO:0015093, GO:0005525

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0630

Tuberculist Genomic Region

MMP1008 Indole-3-glycerol phosphate synthase (NCBI)

Details for MMP1008 - Indole-3-glycerol phosphate synthase (NCBI)

GO Terms: GO:0006568, GO:0004425

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1008

Tuberculist Genomic Region

MMP0885 TPR repeat:ATP/GTP-binding site motif A (P-loop) (NCBI)

Details for MMP0885 - TPR repeat:ATP/GTP-binding site motif A (P-loop) (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0885

Tuberculist Genomic Region

MMP1598 conserved hypothetical protein (NCBI)

Details for MMP1598 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1598

Tuberculist Genomic Region

MMP0995 conserved hypothetical archaeal protein (NCBI)

Details for MMP0995 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0995

Tuberculist Genomic Region

MMP1599 Trk system potassium uptake protein A (NCBI)

Details for MMP1599 - Trk system potassium uptake protein A (NCBI)

GO Terms: GO:0006118, GO:0006813, GO:0051287, GO:0008324, GO:0016616

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1599

Tuberculist Genomic Region

MMP1002 Tryptophan synthase, alpha chain (NCBI)

Details for MMP1002 - Tryptophan synthase, alpha chain (NCBI)

GO Terms: GO:0006568, GO:0004834

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1002

Tuberculist Genomic Region

MMP0678 Predicted transcriptional regulator; Helix-turn-helix motif (NCBI)

Details for MMP0678 - Predicted transcriptional regulator; Helix-turn-helix motif (NCBI)

GO Terms: GO:0043565

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0678

Tuberculist Genomic Region

Displaying 1 - 18 of 18

Motifs

Motif 1: e-value: 440 e-value: 6800

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: CC
Category GO ID GO Term Annotated Expected Significant p-value
CC GO:0005886 plasma membrane 4 0.02 1 0.0220
CC GO:0071944 cell periphery 8 0.04 1 0.0440
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016830 carbon-carbon lyase activity 10 0.17 3 0.0004
MF GO:0016836 hydro-lyase activity 11 0.18 2 0.0132
MF GO:0016835 carbon-oxygen lyase activity 13 0.22 2 0.0184
MF GO:0003824 catalytic activity 298 5.01 9 0.0239

Comments

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