Methanococcus maripaludis S2 Module 80 Residual: 0.35

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Summary

Residual: 0.35 Score: -19.012 version: mmp_cmonkey_11_Oct_11

Members

MMP0285 Phosphoesterase, RecJ-like:TrkA-N:Phosphoesterase, DHHA1 (NCBI)

Details for MMP0285 - Phosphoesterase, RecJ-like:TrkA-N:Phosphoesterase, DHHA1 (NCBI)

GO Terms: GO:0006813, GO:0003676, GO:0016787, GO:0030145

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0285

Tuberculist Genomic Region

MMP0349 2-hydroxyglutaryl-CoA dehydratase (Component A) related protein (NCBI)

Details for MMP0349 - 2-hydroxyglutaryl-CoA dehydratase (Component A) related protein (NCBI)

GO Terms: GO:0005975

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0349

Tuberculist Genomic Region

MMP0287 Conserved Hypothetical protein with 2 CBS domains. (NCBI)

Details for MMP0287 - Conserved Hypothetical protein with 2 CBS domains. (NCBI)

GO Terms: GO:0008152, GO:0003677, GO:0003938

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0287

Tuberculist Genomic Region

MMP0351 DegT/DnrJ/EryC1/StrS aminotransferase (NCBI)

Details for MMP0351 - DegT/DnrJ/EryC1/StrS aminotransferase (NCBI)

GO Terms: GO:0003824, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0351

Tuberculist Genomic Region

MMP0350 Bacterial transferase hexapeptide repeat (NCBI)

Details for MMP0350 - Bacterial transferase hexapeptide repeat (NCBI)

GO Terms: GO:0008415

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0350

Tuberculist Genomic Region

MMP0381 3-isopropylmalate dehydratase small subunit Related (NCBI)

Details for MMP0381 - 3-isopropylmalate dehydratase small subunit Related (NCBI)

GO Terms: GO:0009098, GO:0009316, GO:0003861

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0381

Tuberculist Genomic Region

MMP0352 Putative oxidoreductase (NCBI)

Details for MMP0352 - Putative oxidoreductase (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0352

Tuberculist Genomic Region

MMP0393 phosphoesterase-like protein (NCBI)

Details for MMP0393 - phosphoesterase-like protein (NCBI)

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0393

Tuberculist Genomic Region

MMP0353 UDP-glucose/GDP-mannose dehydrogenase Related protein (NCBI)

Details for MMP0353 - UDP-glucose/GDP-mannose dehydrogenase Related protein (NCBI)

GO Terms: GO:0006118, GO:0016616, GO:0051287

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0353

Tuberculist Genomic Region

MMP0401 5-methyltetrahydropteroyltriglutamate-- homocystei ne S-methyltransferase (NCBI)

Details for MMP0401 - 5-methyltetrahydropteroyltriglutamate-- homocystei ne S-methyltransferase (NCBI)

GO Terms: GO:0009086, GO:0003871

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0401

Tuberculist Genomic Region

MMP0354 putative oligosaccharide transporter (NCBI)

Details for MMP0354 - putative oligosaccharide transporter (NCBI)

GO Terms: GO:0000271, GO:0006855, GO:0016020, GO:0015297, GO:0005515, GO:0015238

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0354

Tuberculist Genomic Region

MMP0911 related to iron-sulfur flavoprotein of Methanosarcina thermophila (NCBI)

Details for MMP0911 - related to iron-sulfur flavoprotein of Methanosarcina thermophila (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0911

Tuberculist Genomic Region

MMP0356 Glycosyl transferase, group 1 (NCBI)

Details for MMP0356 - Glycosyl transferase, group 1 (NCBI)

GO Terms: GO:0009058

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0356

Tuberculist Genomic Region

MMP1094 phosphoenolpyruvate synthase (NCBI)

Details for MMP1094 - phosphoenolpyruvate synthase (NCBI)

GO Terms: GO:0016310, GO:0006094, GO:0005524, GO:0008986

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1094

Tuberculist Genomic Region

MMP0398 Conserved hypothetical archaeal protein (NCBI)

Details for MMP0398 - Conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0016310, GO:0005524, GO:0016301

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0398

Tuberculist Genomic Region

MMP1287 Protein of unknown function UPF0058 (NCBI)

Details for MMP1287 - Protein of unknown function UPF0058 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1287

Tuberculist Genomic Region

MMP0705 UDP-N-acetylglucosamine 2-epimerase (NCBI)

Details for MMP0705 - UDP-N-acetylglucosamine 2-epimerase (NCBI)

GO Terms: GO:0006047, GO:0009103, GO:0008761

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0705

Tuberculist Genomic Region

MMP1288

Details for MMP1288 -

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1288

Tuberculist Genomic Region

MMP0920 S-adenosyl-L-homocysteine hydrolase (NCBI)

Details for MMP0920 - S-adenosyl-L-homocysteine hydrolase (NCBI)

GO Terms: GO:0006730, GO:0004013

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0920

Tuberculist Genomic Region

MMP1315 2-oxoglutarate oxidoreductase gamma subunit (NCBI)

Details for MMP1315 - 2-oxoglutarate oxidoreductase gamma subunit (NCBI)

GO Terms: GO:0006118, GO:0047553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1315

Tuberculist Genomic Region

MMP1286 possible DnaG-type primase (NCBI)

Details for MMP1286 - possible DnaG-type primase (NCBI)

GO Terms: GO:0006304, GO:0003676

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1286

Tuberculist Genomic Region

MMP1587 conserved hypothetical archaeal protein (NCBI)

Details for MMP1587 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0016020, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1587

Tuberculist Genomic Region

Displaying 1 - 22 of 22

Motifs

Motif 1: e-value: 18 e-value: 1100

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0402

Conserved hypothetical Archael protein (NCBI)

MMP1023

Transcriptional regulator, TetR Family Member (NCBI)
 up-regulates 0.38

MMP0402

MMP1023

MMP0033

LysR family member (NCBI)
 up-regulates 0.37

MMP0033

MMP0033

LysR family member (NCBI)

H2

 up-regulates 0.35

MMP0033

H2

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0048037 cofactor binding 32 0.66 3 0.0250
MF GO:0003824 catalytic activity 298 6.17 10 0.0440

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