Methanococcus maripaludis S2 Module 106 Residual: 0.34

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.34 Score: -15.5436 version: mmp_cmonkey_11_Oct_11

Members

MMP0030 DNA replication protein; MCM family; putative (NCBI)

Details for MMP0030 - DNA replication protein; MCM family; putative (NCBI)

GO Terms: GO:0006270, GO:0003677, GO:0005524, GO:0008094

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0030

Tuberculist Genomic Region

MMP1611 conserved hypothetical protein (NCBI)

Details for MMP1611 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1611

Tuberculist Genomic Region

MMP0531 hypothetical (NCBI)

Details for MMP0531 - hypothetical (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0531

Tuberculist Genomic Region

MMP1682 single stranded DNA-specific exonuclease (NCBI)

Details for MMP1682 - single stranded DNA-specific exonuclease (NCBI)

GO Terms: GO:0003676, GO:0016787, GO:0030145

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1682

Tuberculist Genomic Region

MMP0598 archaeal phosphoglycerate mutase-related (NCBI)

Details for MMP0598 - archaeal phosphoglycerate mutase-related (NCBI)

GO Terms: GO:0046537, GO:0046538, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0598

Tuberculist Genomic Region

MMP1712 Transcriptional regulator, LysR Family Member (NCBI)

Details for MMP1712 - Transcriptional regulator, LysR Family Member (NCBI)

GO Terms: GO:0006355, GO:0003700

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1712

Tuberculist Genomic Region

MMP0969 hypothetical protein (NCBI)

Details for MMP0969 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0969

Tuberculist Genomic Region

MMP0425 Conserved hypothetical protein (NCBI)

Details for MMP0425 - Conserved hypothetical protein (NCBI)

GO Terms: GO:0009396, GO:0005524, GO:0030272

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0425

Tuberculist Genomic Region

MMP1069 Basic helix-loop-helix dimerization domain bHLH:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type (NCBI)

Details for MMP1069 - Basic helix-loop-helix dimerization domain bHLH:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type (NCBI)

GO Terms: GO:0006508, GO:0008233

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1069

Tuberculist Genomic Region

MMP0426 Nitroreductase family (NCBI)

Details for MMP0426 - Nitroreductase family (NCBI)

GO Terms: GO:0006118, GO:0016491

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0426

Tuberculist Genomic Region

MMP1071 conserved hypothetical archaeal protein (NCBI)

Details for MMP1071 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1071

Tuberculist Genomic Region

MMP0535 conserved hypothetical archaeal protein (NCBI)

Details for MMP0535 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0535

Tuberculist Genomic Region

MMP1072 Aminotransferase (subgroup I) similar to Aromatic Aminotransferase (NCBI)

Details for MMP1072 - Aminotransferase (subgroup I) similar to Aromatic Aminotransferase (NCBI)

GO Terms: GO:0009058, GO:0004069, GO:0016847, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1072

Tuberculist Genomic Region

MMP0958 conserved hypothetical protein (NCBI)

Details for MMP0958 - conserved hypothetical protein (NCBI)

GO Terms: GO:0045454, GO:0006662, GO:0015035, GO:0009055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0958

Tuberculist Genomic Region

MMP0084 conserved hypothetical protein (NCBI)

Details for MMP0084 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0084

Tuberculist Genomic Region

MMP0959 thioredoxin reductase (NCBI)

Details for MMP0959 - thioredoxin reductase (NCBI)

GO Terms: GO:0006118, GO:0004791

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0959

Tuberculist Genomic Region

MMP0085 conserved hypothetical protein (NCBI)

Details for MMP0085 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006412, GO:0005634

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0085

Tuberculist Genomic Region

MMP1001 conserved hypothetical protein (NCBI)

Details for MMP1001 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1001

Tuberculist Genomic Region

MMP0091 conserved hypothetical archaeal protein (NCBI)

Details for MMP0091 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0091

Tuberculist Genomic Region

MMP1051 Survival protein SurE (NCBI)

Details for MMP1051 - Survival protein SurE (NCBI)

GO Terms: GO:0008253, GO:0008254, GO:0017175

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1051

Tuberculist Genomic Region

MMP0420 CBS domain Related protein (NCBI)

Details for MMP0420 - CBS domain Related protein (NCBI)

GO Terms: GO:0008152, GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0420

Tuberculist Genomic Region

MMP1598 conserved hypothetical protein (NCBI)

Details for MMP1598 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1598

Tuberculist Genomic Region

MMP0605 Conserved Hypothetical protein (NCBI)

Details for MMP0605 - Conserved Hypothetical protein (NCBI)

GO Terms: GO:0003723

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0605

Tuberculist Genomic Region

MMP0001 conserved archaeal protein (NCBI)

Details for MMP0001 - conserved archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0001

Tuberculist Genomic Region

MMP0808 conserved hypothetical protein (NCBI)

Details for MMP0808 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006118, GO:0009055, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0808

Tuberculist Genomic Region

MMP0239 conserved hypothetical archaeal protein (NCBI)

Details for MMP0239 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0239

Tuberculist Genomic Region

MMP0809 Phosphoribosylaminoimidazole carboxylase related protein (NCBI)

Details for MMP0809 - Phosphoribosylaminoimidazole carboxylase related protein (NCBI)

GO Terms: GO:0006189, GO:0009320, GO:0004638

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0809

Tuberculist Genomic Region

MMP0630 ferrous iron transporter (GTP-binding) (NCBI)

Details for MMP0630 - ferrous iron transporter (GTP-binding) (NCBI)

GO Terms: GO:0015684, GO:0005622, GO:0016021, GO:0009276, GO:0001882, GO:0015093, GO:0005525

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0630

Tuberculist Genomic Region

MMP1073 conserved hypothetical protein (NCBI)

Details for MMP1073 - conserved hypothetical protein (NCBI)

GO Terms: GO:0015992, GO:0005451

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1073

Tuberculist Genomic Region

MMP1234 conserved hypothetical membrane related protein (NCBI)

Details for MMP1234 - conserved hypothetical membrane related protein (NCBI)

GO Terms: GO:0003824

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1234

Tuberculist Genomic Region

MMP1074 Conserved hypothetical protein (NCBI)

Details for MMP1074 - Conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1074

Tuberculist Genomic Region

MMP1235 Molybdopterin biosynthesis MoaE (NCBI)

Details for MMP1235 - Molybdopterin biosynthesis MoaE (NCBI)

GO Terms: GO:0006777

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1235

Tuberculist Genomic Region

MMP1091 ADP-glucose pyrophosphorylase (NCBI)

Details for MMP1091 - ADP-glucose pyrophosphorylase (NCBI)

GO Terms: GO:0009058, GO:0006011, GO:0003983

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1091

Tuberculist Genomic Region

MMP1282 Conseved hypothetical protein NTP-binding (NCBI)

Details for MMP1282 - Conseved hypothetical protein NTP-binding (NCBI)

GO Terms: GO:0019205

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1282

Tuberculist Genomic Region

MMP1469 conserved hypothetical protein (NCBI)

Details for MMP1469 - conserved hypothetical protein (NCBI)

GO Terms: GO:0006812, GO:0016021, GO:0008324

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1469

Tuberculist Genomic Region

MMP0002 L-seryl-tRNA selenium transferase related protein (NCBI)

Details for MMP0002 - L-seryl-tRNA selenium transferase related protein (NCBI)

GO Terms: GO:0001514, GO:0009058, GO:0005737, GO:0016769, GO:0004125, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0002

Tuberculist Genomic Region

MMP1573 Dethiobiotin synthetase (NCBI)

Details for MMP1573 - Dethiobiotin synthetase (NCBI)

GO Terms: GO:0009102, GO:0005524, GO:0004141

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1573

Tuberculist Genomic Region

Displaying 1 - 37 of 37

Motifs

Motif 1: e-value: 1100 e-value: 5600

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0041

transcription initiation factor B (NCBI)

MMP1023

Transcriptional regulator, TetR Family Member (NCBI)
 down-regulates -0.17

MMP0041

MMP1023

MMP1065

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.13

MMP1065

MMP0460

Conserved Hypothetical Protein (NCBI)

MMP0799

Transcriptional regulator, TetR Family Member (NCBI)
 up-regulates 0.13

MMP0460

MMP0799

MMP0568

transcriptional regulator related protein (NCBI)

H2

 down-regulates -0.12

MMP0568

H2

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0008324 cation transmembrane transporter activit... 12 0.28 2 0.0290

Comments

Log in to post comments