Methanococcus maripaludis S2 Module 115 Residual: 0.49

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Summary

Residual: 0.49 Score: -10.8379 version: mmp_cmonkey_11_Oct_11

Members

MMP0038 conserved hypothetical protein (NCBI)

Details for MMP0038 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009306, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0038

Tuberculist Genomic Region

MMP0689 Xanthine/uracil permease family (NCBI)

Details for MMP0689 - Xanthine/uracil permease family (NCBI)

GO Terms: GO:0006810, GO:0016020, GO:0005215

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0689

Tuberculist Genomic Region

MMP0039 conserved hypothetical protein (NCBI)

Details for MMP0039 - conserved hypothetical protein (NCBI)

GO Terms: GO:0009306, GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0039

Tuberculist Genomic Region

MMP0918 Asparagine synthetase (glutamine-hydrolyzing) (NCBI)

Details for MMP0918 - Asparagine synthetase (glutamine-hydrolyzing) (NCBI)

GO Terms: GO:0006529, GO:0004066

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0918

Tuberculist Genomic Region

MMP0040 type II secretion system protein; putative; subunit 1 (NCBI)

Details for MMP0040 - type II secretion system protein; putative; subunit 1 (NCBI)

GO Terms: GO:0006810, GO:0005622, GO:0005524, GO:0017111

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0040

Tuberculist Genomic Region

MMP0942 conserved hypothetical protein (NCBI)

Details for MMP0942 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0942

Tuberculist Genomic Region

MMP0118 conserved hypothetical protein (NCBI)

Details for MMP0118 - conserved hypothetical protein (NCBI)

GO Terms: GO:0016787

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0118

Tuberculist Genomic Region

MMP0948 conserved hypothetical protein (NCBI)

Details for MMP0948 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0948

Tuberculist Genomic Region

MMP0579 conserved hypothetical archaeal protein (NCBI)

Details for MMP0579 - conserved hypothetical archaeal protein (NCBI)

GO Terms: GO:0009229, GO:0004788, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0579

Tuberculist Genomic Region

MMP0969 hypothetical protein (NCBI)

Details for MMP0969 - hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0969

Tuberculist Genomic Region

MMP0580 Radical-activating enzyme (NCBI)

Details for MMP0580 - Radical-activating enzyme (NCBI)

GO Terms: GO:0008152, GO:0043365, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0580

Tuberculist Genomic Region

MMP1069 Basic helix-loop-helix dimerization domain bHLH:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type (NCBI)

Details for MMP1069 - Basic helix-loop-helix dimerization domain bHLH:Peptidase U7:Signal peptide peptidase, SppA 36 kDa type (NCBI)

GO Terms: GO:0006508, GO:0008233

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1069

Tuberculist Genomic Region

MMP0865 Aminotransferase (subgroup II) similar to Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI)

Details for MMP0865 - Aminotransferase (subgroup II) similar to Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (NCBI)

GO Terms: GO:0009102, GO:0004015, GO:0030170

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0865

Tuberculist Genomic Region

MMP1186 Eukaryotic thiol (cysteine) protease, active site:ATP/GTP-binding site motif A (P-loop):Sigma-54 factor interaction domain:Pu... (NCBI)

Details for MMP1186 - Eukaryotic thiol (cysteine) protease, active site:ATP/GTP-binding site motif A (P-loop):Sigma-54 factor interaction domain:Pu... (NCBI)

GO Terms: GO:0015995, GO:0006355, GO:0006508, GO:0030163, GO:0015979, GO:0005622, GO:0005524, GO:0016851, GO:0008134, GO:0004176, GO:0008846

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1186

Tuberculist Genomic Region

MMP0883 hypothetical protein (NCBI)

Details for MMP0883 - hypothetical protein (NCBI)

GO Terms: GO:0005488

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0883

Tuberculist Genomic Region

MMP1290 conserved hypothetical protein (NCBI)

Details for MMP1290 - conserved hypothetical protein (NCBI)

GO Terms: GO:0015684, GO:0005975, GO:0005622, GO:0016021, GO:0009276, GO:0005525, GO:0015093, GO:0004553

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1290

Tuberculist Genomic Region

MMP1279 Camphor resistance CrcB protein (NCBI)

Details for MMP1279 - Camphor resistance CrcB protein (NCBI)

GO Terms: GO:0016020

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1279

Tuberculist Genomic Region

MMP1317 conserved hypothetical protein (NCBI)

Details for MMP1317 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1317

Tuberculist Genomic Region

MMP1711 Proliferating cell nuclear antigen, PCNA (NCBI)

Details for MMP1711 - Proliferating cell nuclear antigen, PCNA (NCBI)

GO Terms: GO:0006275, GO:0006281, GO:0000074, GO:0043626, GO:0030337, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1711

Tuberculist Genomic Region

MMP1430 putative TRK system cation (K+) uptake protein (NCBI)

Details for MMP1430 - putative TRK system cation (K+) uptake protein (NCBI)

GO Terms: GO:0006812, GO:0008324

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1430

Tuberculist Genomic Region

MMP0165 ABC transporter, family 2 (NCBI)

Details for MMP0165 - ABC transporter, family 2 (NCBI)

GO Terms: GO:0006810, GO:0016020, GO:0005524, GO:0042626

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0165

Tuberculist Genomic Region

MMP1471 conserved hypothetical protein (NCBI)

Details for MMP1471 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1471

Tuberculist Genomic Region

MMP0233 Conserved hypothetical Archael protein (NCBI)

Details for MMP0233 - Conserved hypothetical Archael protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0233

Tuberculist Genomic Region

MMP1704 conserved hypothetical archeal protein (NCBI)

Details for MMP1704 - conserved hypothetical archeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1704

Tuberculist Genomic Region

MMP0403 Conserved hypothetical Archael protein (NCBI)

Details for MMP0403 - Conserved hypothetical Archael protein (NCBI)

GO Terms: GO:0005975, GO:0030259, GO:0016758, GO:0030246

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0403

Tuberculist Genomic Region

MMP1722 Imidazoleglycerol-phosphate synthase, cyclase subunit (NCBI)

Details for MMP1722 - Imidazoleglycerol-phosphate synthase, cyclase subunit (NCBI)

GO Terms: GO:0000105, GO:0005737, GO:0009382, GO:0000107

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1722

Tuberculist Genomic Region

MMP0632 ATP/GTP-binding site motif A (P-loop) (NCBI)

Details for MMP0632 - ATP/GTP-binding site motif A (P-loop) (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0632

Tuberculist Genomic Region

MMP0607 Transcriptional repressor of nif and glnA operons (NCBI)

Details for MMP0607 - Transcriptional repressor of nif and glnA operons (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0607

Tuberculist Genomic Region

MMP0666 Na+/Pi-cotransporter related protein (NCBI)

Details for MMP0666 - Na+/Pi-cotransporter related protein (NCBI)

GO Terms: GO:0006817, GO:0016020, GO:0015321

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0666

Tuberculist Genomic Region

Displaying 1 - 29 of 29

Motifs

Motif 1: e-value: 320 e-value: 2000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0033

LysR family member (NCBI)

MMP0168

Transcriptional regulator PadR-like family (NCBI)
 up-regulates 0.67

MMP0033

MMP0168

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0009066 aspartate family amino acid metabolic pr... 4 0.02 1 0.0210
BP GO:0009067 aspartate family amino acid biosynthetic... 4 0.02 1 0.0210
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0015075 ion transmembrane transporter activity 18 0.26 2 0.0250
MF GO:0022891 substrate-specific transmembrane transpo... 20 0.28 2 0.0300
MF GO:0022892 substrate-specific transporter activity 20 0.28 2 0.0300
MF GO:0022857 transmembrane transporter activity 25 0.36 2 0.0460

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