Methanococcus maripaludis S2 Module 120 Residual: 0.26

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Summary

Residual: 0.26 Score: -17.4946 version: mmp_cmonkey_11_Oct_11

Members

MMP0223 conserved hypothetical protein (NCBI)

Details for MMP0223 - conserved hypothetical protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0223

Tuberculist Genomic Region

MMP1113 transketoloase, C terminal half (NCBI)

Details for MMP1113 - transketoloase, C terminal half (NCBI)

GO Terms: GO:0008152, GO:0004802

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1113

Tuberculist Genomic Region

MMP1316 2-oxoglutarate oxidoreductase beta subunit (NCBI)

Details for MMP1316 - 2-oxoglutarate oxidoreductase beta subunit (NCBI)

GO Terms: GO:0047553, GO:0030976

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1316

Tuberculist Genomic Region

MMP1114 Pentose-5-phosphate 3-epimerase (NCBI)

Details for MMP1114 - Pentose-5-phosphate 3-epimerase (NCBI)

GO Terms: GO:0005975, GO:0004750

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1114

Tuberculist Genomic Region

MMP1532 Phosphoglycerate kinase (NCBI)

Details for MMP1532 - Phosphoglycerate kinase (NCBI)

GO Terms: GO:0006096, GO:0004618

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1532

Tuberculist Genomic Region

MMP1115 Transketolase, N terminal half (NCBI)

Details for MMP1115 - Transketolase, N terminal half (NCBI)

GO Terms: GO:0004802

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1115

Tuberculist Genomic Region

MMP0013 argininosuccinate lyase (NCBI)

Details for MMP0013 - argininosuccinate lyase (NCBI)

GO Terms: GO:0042450, GO:0004056

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0013

Tuberculist Genomic Region

MMP1222 DNA repair and recombination protein radA (NCBI)

Details for MMP1222 - DNA repair and recombination protein radA (NCBI)

GO Terms: GO:0006310, GO:0006281, GO:0005622, GO:0005524, GO:0043565, GO:0003684, GO:0008094, GO:0005515

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1222

Tuberculist Genomic Region

MMP0073 Argininosuccinate synthase (NCBI)

Details for MMP0073 - Argininosuccinate synthase (NCBI)

GO Terms: GO:0006526, GO:0005524, GO:0004055

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0073

Tuberculist Genomic Region

MMP1253 Protein of unknown function DUF89 (NCBI)

Details for MMP1253 - Protein of unknown function DUF89 (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1253

Tuberculist Genomic Region

MMP0133 IMP dehydrogenase (NCBI)

Details for MMP0133 - IMP dehydrogenase (NCBI)

GO Terms: GO:0006177, GO:0003938

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0133

Tuberculist Genomic Region

MMP1254 AIR synthase related protein:Phosphoribosylformylglycinamidine cyclo-ligase (NCBI)

Details for MMP1254 - AIR synthase related protein:Phosphoribosylformylglycinamidine cyclo-ligase (NCBI)

GO Terms: GO:0006189, GO:0005737, GO:0004641

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1254

Tuberculist Genomic Region

MMP0341 pyruvate carboxylase subunit A (NCBI)

Details for MMP0341 - pyruvate carboxylase subunit A (NCBI)

GO Terms: GO:0008152, GO:0009343, GO:0003989, GO:0004075, GO:0009374, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0341

Tuberculist Genomic Region

MMP1255 Phenylalanyl-tRNA synthetase beta subunit (NCBI)

Details for MMP1255 - Phenylalanyl-tRNA synthetase beta subunit (NCBI)

GO Terms: GO:0006432, GO:0009328, GO:0004826, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1255

Tuberculist Genomic Region

MMP0955 succinate--CoA ligase (ADP-forming); alpha subunit (NCBI)

Details for MMP0955 - succinate--CoA ligase (ADP-forming); alpha subunit (NCBI)

GO Terms: GO:0008152, GO:0009361, GO:0004775

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0955

Tuberculist Genomic Region

MMP1314 Phosphoesterase, RecJ-like:RNA binding S1:OB-fold nucleic acid binding domain Related protein (NCBI)

Details for MMP1314 - Phosphoesterase, RecJ-like:RNA binding S1:OB-fold nucleic acid binding domain Related protein (NCBI)

GO Terms: GO:0006457, GO:0003723, GO:0031072, GO:0051082, GO:0016787, GO:0030145

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1314

Tuberculist Genomic Region

MMP1101 Aminotransferase (subgroup II) similar to Acetylornithine aminotransferase (NCBI)

Details for MMP1101 - Aminotransferase (subgroup II) similar to Acetylornithine aminotransferase (NCBI)

GO Terms: GO:0006525, GO:0030170, GO:0003992

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1101

Tuberculist Genomic Region

MMP0340 pyruvate carboxylase subunit B (NCBI)

Details for MMP0340 - pyruvate carboxylase subunit B (NCBI)

GO Terms: GO:0006814, GO:0008152, GO:0004736, GO:0008948

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0340

Tuberculist Genomic Region

Displaying 1 - 18 of 18

Motifs

Motif 1: e-value: 14000 e-value: 14000

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences
[field_regulator_taxonomy_regulat_1]

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0006164 purine nucleotide biosynthetic process 16 0.33 2 0.0360
BP GO:0009127 purine nucleoside monophosphate biosynth... 16 0.33 2 0.0360
BP GO:0009152 purine ribonucleotide biosynthetic proce... 16 0.33 2 0.0360
BP GO:0009168 purine ribonucleoside monophosphate bios... 16 0.33 2 0.0360
BP GO:0006163 purine nucleotide metabolic process 17 0.35 2 0.0400
BP GO:0009126 purine nucleoside monophosphate metaboli... 17 0.35 2 0.0400
BP GO:0009150 purine ribonucleotide metabolic process 17 0.35 2 0.0400
BP GO:0009167 purine ribonucleoside monophosphate meta... 17 0.35 2 0.0400
BP GO:0072522 purine-containing compound biosynthetic ... 17 0.35 2 0.0400
BP GO:0072521 purine-containing compound metabolic pro... 19 0.40 2 0.0490
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0016744 transferase activity, transferring aldeh... 4 0.06 2 0.0013
MF GO:0005524 ATP binding 147 2.28 6 0.0145
MF GO:0030554 adenyl nucleotide binding 149 2.31 6 0.0155
MF GO:0032559 adenyl ribonucleotide binding 149 2.31 6 0.0155
MF GO:0035639 purine ribonucleoside triphosphate bindi... 169 2.62 6 0.0285
MF GO:0001883 purine nucleoside binding 171 2.65 6 0.0301
MF GO:0017076 purine nucleotide binding 171 2.65 6 0.0301
MF GO:0032549 ribonucleoside binding 171 2.65 6 0.0301
MF GO:0032550 purine ribonucleoside binding 171 2.65 6 0.0301
MF GO:0032555 purine ribonucleotide binding 171 2.65 6 0.0301
MF GO:0001882 nucleoside binding 172 2.67 6 0.0310
MF GO:0032553 ribonucleotide binding 181 2.81 6 0.0393
MF GO:0097367 carbohydrate derivative binding 182 2.83 6 0.0403

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