MMP1314 MMP1314 Phosphoesterase, RecJ-like:RNA binding S1:OB-fold nucleic acid binding domain Related protein (NCBI)

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Methanococcus maripaludis S2

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Summary

Locus Tag Symbol Synonyms Product Protein Synonyms Start End Strand PubMed ID
MMP1314 MMP1314 MMP1314 MMP1314 Phosphoesterase, RecJ-like:RNA binding S1:OB-fold nucleic acid binding domain Related protein (NCBI) Methanococcus maripaludis strain S2, complete sequence 1300796 1298511 - 15466049

Regulatory Modules

Residual Expression Plot
mmp-bicluster_0052 0.39
mmp-bicluster_0120 0.26

XReference

Uniprot NCBI Gene NCBI Protein GI Number MicrobesOnline EnsemblBacteria InterPro EggNOG
Q6LXN5 2762033 NP_988434.1; 45358877 533513 CAF30870 IPR001667, IPR001305, IPR012340, IPR003029, IPR022967 COG1107

Mutations

Line Position Effect Impact Class Percent Frequency Sample Title
HR2 1 298 610 FRAME_SHIFT NONE 92 HR2.152.10.M01 BX950229-MMP1314-1298610-HR2.152.10.M01
HR2 1 298 610 FRAME_SHIFT NONE 82 HR2.152.10.M03 BX950229-MMP1314-1298610-HR2.152.10.M03
HR2 1 298 610 FRAME_SHIFT NONE 86 HR2.152.10.M02 BX950229-MMP1314-1298610-HR2.152.10.M02
UA3 1 298 610 FRAME_SHIFT NONE 65 TG_UA3 BX950229-MMP1314-1298610-TG_UA3
UA3 1 298 610 FRAME_SHIFT NONE 84 EG_UA3_45 BX950229-MMP1314-1298610-EG_UA3_45
UE3 1 298 610 FRAME_SHIFT NONE 49 EG_UE3_45 BX950229-MMP1314-1298610-EG_UE3_45
UA3 1 298 610 FRAME_SHIFT NONE 76 EG_UA3_76 BX950229-MMP1314-1298610-EG_UA3_76
UE3 1 298 610 FRAME_SHIFT NONE 96 EG_UE3_76 BX950229-MMP1314-1298610-EG_UE3_76
UE3 1 298 610 FRAME_SHIFT NONE 93 EG_UE3_118 BX950229-MMP1314-1298610-EG_UE3_118
UA3 1 298 610 FRAME_SHIFT NONE 86 EG_UA3_118 BX950229-MMP1314-1298610-EG_UA3_118

Transposon mutants

Title Insert TAG Module
MMP1314

Homology

Orthologues Paralogues

Functions

COG
(L) COG1107 | Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain

Essentiality

L1.Cm.T1 L1.Cm.T2 L1.cN.T1 L1.cN.T2 L1.T0 L2.Cm.T1 L2.Cm.T2 L2.cN.T1 L2.cN.T2 L2.T0
29 22 22 12 52 22 27 18 15 34

Product Synonyms

Product (LegacyBRC) Product (RefSeq)

Operon

Refseq

GI Number Accession Blast Conserved Domains
45358877 NP_988434.1 Run

GO Terms

String Network

Link to STRINGS STRINGS Network
MMP1314

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