Methanococcus maripaludis S2 Module 141 Residual: 0.29

×

Error message

  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.
  • Unable to create CTools CSS cache directory. Check the permissions on your files directory.

Summary

Residual: 0.29 Score: -23.8804 version: mmp_cmonkey_11_Oct_11

Members

MMP0137 Deoxyhypusine synthase (NCBI)

Details for MMP0137 - Deoxyhypusine synthase (NCBI)

GO Terms: GO:0008612, GO:0050983, GO:0004171

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0137

Tuberculist Genomic Region

MMP0920 S-adenosyl-L-homocysteine hydrolase (NCBI)

Details for MMP0920 - S-adenosyl-L-homocysteine hydrolase (NCBI)

GO Terms: GO:0006730, GO:0004013

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0920

Tuberculist Genomic Region

MMP0319 precorrin-2 C-20 methyltransferase (NCBI)

Details for MMP0319 - precorrin-2 C-20 methyltransferase (NCBI)

GO Terms: GO:0009236, GO:0030788, GO:0043781

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0319

Tuberculist Genomic Region

MMP0921 conserved hypothetical protein (NCBI)

Details for MMP0921 - conserved hypothetical protein (NCBI)

GO Terms: GO:0004526

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0921

Tuberculist Genomic Region

MMP1085 conserved hypothetical protein (NCBI)

Details for MMP1085 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0008168

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1085

Tuberculist Genomic Region

MMP0989 DNA topoisomerase VI B (NCBI)

Details for MMP0989 - DNA topoisomerase VI B (NCBI)

GO Terms: GO:0006268, GO:0006265, GO:0005694, GO:0005524, GO:0003918

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0989

Tuberculist Genomic Region

MMP1108 magnesium, nickel and cobalt transport protein (NCBI)

Details for MMP1108 - magnesium, nickel and cobalt transport protein (NCBI)

GO Terms: GO:0006824, GO:0015693, GO:0016020, GO:0015087, GO:0015095

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1108

Tuberculist Genomic Region

MMP1014

Details for MMP1014 -

GO Terms: GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1014

Tuberculist Genomic Region

MMP1614 histidyl-tRNA synthetase (NCBI)

Details for MMP1614 - histidyl-tRNA synthetase (NCBI)

GO Terms: GO:0000105, GO:0006427, GO:0005737, GO:0005524, GO:0004821

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1614

Tuberculist Genomic Region

MMP1086 conserved hypothetical protein (NCBI)

Details for MMP1086 - conserved hypothetical protein (NCBI)

GO Terms: GO:0008152, GO:0003824, GO:0051536

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1086

Tuberculist Genomic Region

MMP0320 shikimate kinase (archaeal) (NCBI)

Details for MMP0320 - shikimate kinase (archaeal) (NCBI)

GO Terms: GO:0016310, GO:0009073, GO:0005737, GO:0004765, GO:0005524

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0320

Tuberculist Genomic Region

MMP1107 Signal recognition particle protein SRP19 (NCBI)

Details for MMP1107 - Signal recognition particle protein SRP19 (NCBI)

GO Terms: GO:0006614, GO:0048500, GO:0008312

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1107

Tuberculist Genomic Region

MMP0340 pyruvate carboxylase subunit B (NCBI)

Details for MMP0340 - pyruvate carboxylase subunit B (NCBI)

GO Terms: GO:0006814, GO:0008152, GO:0004736, GO:0008948

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0340

Tuberculist Genomic Region

MMP1112 conserved hypothetical archaeal protein (NCBI)

Details for MMP1112 - conserved hypothetical archaeal protein (NCBI)

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1112

Tuberculist Genomic Region

MMP0919 2Fe-2S Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:NADH:cytochrome b5 reductase (CBR) (NCBI)

Details for MMP0919 - 2Fe-2S Ferredoxin:Oxidoreductase FAD/NAD(P)-binding:NADH:cytochrome b5 reductase (CBR) (NCBI)

GO Terms: GO:0006118, GO:0006221, GO:0009055, GO:0051537, GO:0050660

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP0919

Tuberculist Genomic Region

MMP1313 flap endonuclease (NCBI)

Details for MMP1313 - flap endonuclease (NCBI)

GO Terms: GO:0006281, GO:0005634, GO:0004518, GO:0003677

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: MMP1313

Tuberculist Genomic Region

Displaying 1 - 16 of 16

Motifs

Motif 1: e-value: 71 e-value: 6200

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

MMP0033

LysR family member (NCBI)
 up-regulates 0.34

MMP0033

MMP0907

predicted archaeal transcriptional regulator (NCBI)

MMP1646

conserved hypothetical archaeal protein (NCBI)
 up-regulates 0.25

MMP0907

MMP1646

MMP0607

Transcriptional repressor of nif and glnA operons (NCBI)
 up-regulates 0.25

MMP0607

MMP1704

conserved hypothetical archeal protein (NCBI)
 up-regulates 0.12

MMP1704

GO Enrichment

Category: BP
Category GO ID GO Term Annotated Expected Significant p-value
BP GO:0034641 cellular nitrogen compound metabolic pro... 83 1.73 4 0.0330
Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0046873 metal ion transmembrane transporter acti... 3 0.04 1 0.0380

Comments

Log in to post comments