Desulfovibrio vulgaris Hildenborough Module 66 Residual: 0.43 | Syntrophy Portal

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Summary

Residual: 0.43 Score: -46.5868 version: dvh_cmonkey_11_Mar_02

Members

DVU0416 GGDEF domain protein Details for DVU0416 - GGDEF domain protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0416 Tuberculist Genomic Region	DVU2363 Hydroxyethylthiazole kinase Details for DVU2363 - Hydroxyethylthiazole kinase GO Terms: GO:0005524, GO:0004417, GO:0000287, GO:0009228, GO:0009229 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2363 Tuberculist Genomic Region
DVU1192 Acylphosphatase Details for DVU1192 - Acylphosphatase GO Terms: GO:0003998 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1192 Tuberculist Genomic Region	DVU2440 Uncharacterized protein Details for DVU2440 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2440 Tuberculist Genomic Region
DVU1987 UvrABC system protein A Details for DVU1987 - UvrABC system protein A GO Terms: GO:0005524, GO:0016887, GO:0003677, GO:0009432, GO:0005737, GO:0009381, GO:0009380, GO:0046872, GO:0006289 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1987 Tuberculist Genomic Region	DVU2487 Uncharacterized protein Details for DVU2487 - Uncharacterized protein GO Terms: GO:0016020, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2487 Tuberculist Genomic Region
DVU2089 Uncharacterized protein Details for DVU2089 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2089 Tuberculist Genomic Region	DVU2488 Uncharacterized protein Details for DVU2488 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2488 Tuberculist Genomic Region
DVU2100 Universal stress protein family Details for DVU2100 - Universal stress protein family GO Terms: GO:0006950 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2100 Tuberculist Genomic Region	DVU3315 Dihydroorotate dehydrogenase, electron transfer subunit Details for DVU3315 - Dihydroorotate dehydrogenase, electron transfer subunit GO Terms: GO:0051537, GO:0050660, GO:0016491, GO:0006221 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3315 Tuberculist Genomic Region
DVU2108 MTH1175-like domain family protein Details for DVU2108 - MTH1175-like domain family protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2108 Tuberculist Genomic Region	DVU3381 Transcriptional regulatory protein zraR Details for DVU3381 - Transcriptional regulatory protein zraR GO Terms: GO:0005524, GO:0000160, GO:0006355, GO:0043565, GO:0006351 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3381 Tuberculist Genomic Region
DVU2362 Thiamine-phosphate synthase Details for DVU2362 - Thiamine-phosphate synthase GO Terms: GO:0000287, GO:0009228, GO:0009229, GO:0004789 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2362 Tuberculist Genomic Region	DVU3382 Histidine kinase Details for DVU3382 - Histidine kinase GO Terms: GO:0005524, GO:0016020, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3382 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 2.4 Motif 2:

e-value: 3000

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU0813 Heat-inducible transcription repressor HrcA	up-regulates	0.36	DVU0813
DVU2086 Transcriptional regulator, GntR family	up-regulates	0.18	DVU2086
DVU2114 Sigma-54 dependent transcriptional regulator/response regulator	down-regulates	-0.16	DVU2114

GO Enrichment

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0000287	magnesium ion binding	3	0.02	1	0.0163
MF	GO:0016817	hydrolase activity, acting on acid anhyd...	4	0.02	1	0.0217
MF	GO:0016818	hydrolase activity, acting on acid anhyd...	4	0.02	1	0.0217
MF	GO:0051537	2 iron, 2 sulfur cluster binding	7	0.04	1	0.0377
MF	GO:0043167	ion binding	422	2.31	5	0.0426

Essentiality

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