Desulfovibrio vulgaris Hildenborough Module 102 Residual: 0.35 | Syntrophy Portal

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Summary

Residual: 0.35 Score: -74.4184 version: dvh_cmonkey_11_Mar_02

Members

DVU0675 Amino acid ABC transporter, periplasmic amino acid-binding protein Details for DVU0675 - Amino acid ABC transporter, periplasmic amino acid-binding protein GO Terms: GO:0005215 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0675 Tuberculist Genomic Region	DVU2599 Uncharacterized protein Details for DVU2599 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2599 Tuberculist Genomic Region
DVU1052 CBS domain protein Details for DVU1052 - CBS domain protein GO Terms: GO:0003824 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1052 Tuberculist Genomic Region	DVU2781 Uncharacterized protein Details for DVU2781 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2781 Tuberculist Genomic Region
DVU1059 Aminotransferase, putative Details for DVU1059 - Aminotransferase, putative GO Terms: GO:0009058, GO:0030170, GO:0008483 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1059 Tuberculist Genomic Region	DVU0610 Uncharacterized protein Details for DVU0610 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU0610 Tuberculist Genomic Region
DVU1234 Membrane protein, putative Details for DVU1234 - Membrane protein, putative GO Terms: GO:0016021 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1234 Tuberculist Genomic Region	DVU1735 Uncharacterized protein Details for DVU1735 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1735 Tuberculist Genomic Region
DVU1815 Cytochrome c oxidase, subunit I, putative Details for DVU1815 - Cytochrome c oxidase, subunit I, putative GO Terms: GO:0009060, GO:0005507, GO:0004129, GO:0022900, GO:0020037, GO:0016021, GO:0005506, GO:0005886, GO:0070469 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1815 Tuberculist Genomic Region	DVU1757 Site-specific recombinase, phage integrase family Details for DVU1757 - Site-specific recombinase, phage integrase family GO Terms: GO:0003677, GO:0015074, GO:0006310 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU1757 Tuberculist Genomic Region
DVU2072 Histidine kinase Details for DVU2072 - Histidine kinase GO Terms: GO:0005524, GO:0006935, GO:0005737, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2072 Tuberculist Genomic Region	DVU2077 Uncharacterized protein Details for DVU2077 - Uncharacterized protein GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2077 Tuberculist Genomic Region
DVU2084 Oligopeptide-binding protein, putative Details for DVU2084 - Oligopeptide-binding protein, putative GO Terms: NA PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2084 Tuberculist Genomic Region	DVU3152 Histidine kinase Details for DVU3152 - Histidine kinase GO Terms: GO:0005524, GO:0016020, GO:0000155 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU3152 Tuberculist Genomic Region
DVU2094 Thiazole synthase Details for DVU2094 - Thiazole synthase GO Terms: GO:0036355, GO:0005737, GO:0016783, GO:0009229 PATRIC Pathways: NA Essentiality: Griffin Essential: NA \| In vitro Essential: NA \| In vivo Essential: NA Go to Gene Page: DVU2094 Tuberculist Genomic Region

Motifs

Motif 1:

e-value: 19 Motif 2:

e-value: 130

Module Median Expression Profiles

Module Plots

Regulation

Regulator	Interaction	Influence Weight	Other Influences
DVU2588 DNA-binding response regulator	up-regulates	0.25	DVU2588
DVU2690 Uncharacterized protein	up-regulates	0.14	DVU2690
DVU2832 Transcriptional regulator cII, putative	up-regulates	0.16	DVU2832

GO Enrichment

Category: BP
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
BP	GO:0045333	cellular respiration	5	0.03	1	0.0270
BP	GO:0015980	energy derivation by oxidation of organi...	6	0.03	1	0.0320

Category: MF
Category	GO ID	GO Term	Annotated	Expected	Significant	p-value
MF	GO:0016830	carbon-carbon lyase activity	10	0.05	1	0.0460

Essentiality

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