Desulfovibrio vulgaris Hildenborough Module 158 Residual: 0.38

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Summary

Residual: 0.38 Score: -63.2262 version: dvh_cmonkey_11_Mar_02

Members

DVU0857 Radical SAM domain protein

Details for DVU0857 - Radical SAM domain protein

GO Terms: GO:0051539, GO:0003824, GO:0046872

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0857

Tuberculist Genomic Region

DVU0758 Uncharacterized protein

Details for DVU0758 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0758

Tuberculist Genomic Region

DVU0865 Zinc metalloprotease

Details for DVU0865 - Zinc metalloprotease

GO Terms: GO:0016021, GO:0046872, GO:0004222, GO:0005886

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0865

Tuberculist Genomic Region

DVU1278 ATP-dependent zinc metalloprotease FtsH

Details for DVU1278 - ATP-dependent zinc metalloprotease FtsH

GO Terms: GO:0005524, GO:0016887, GO:0051301, GO:0016021, GO:0004222, GO:0005886, GO:0030163, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1278

Tuberculist Genomic Region

DVU0994 Uncharacterized protein

Details for DVU0994 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0994

Tuberculist Genomic Region

DVU1336 ATP-dependent Clp protease ATP-binding subunit ClpX

Details for DVU1336 - ATP-dependent Clp protease ATP-binding subunit ClpX

GO Terms: GO:0005524, GO:0006457, GO:0008270

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1336

Tuberculist Genomic Region

DVU1267 Uncharacterized protein

Details for DVU1267 - Uncharacterized protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1267

Tuberculist Genomic Region

DVU1337 Lon protease

Details for DVU1337 - Lon protease

GO Terms: GO:0005524, GO:0004176, GO:0033554, GO:0005737, GO:0006515, GO:0043565, GO:0004252

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1337

Tuberculist Genomic Region

DVU1602 ATP-dependent Clp protease, ATP-binding subunit ClpA

Details for DVU1602 - ATP-dependent Clp protease, ATP-binding subunit ClpA

GO Terms: GO:0005524, GO:0004176

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1602

Tuberculist Genomic Region

DVU1874 Chaperone protein ClpB

Details for DVU1874 - Chaperone protein ClpB

GO Terms: GO:0005524, GO:0005737, GO:0016485, GO:0009408

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU1874

Tuberculist Genomic Region

DVU2470 Membrane protein, putaive

Details for DVU2470 - Membrane protein, putaive

GO Terms: GO:0016021

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2470

Tuberculist Genomic Region

DVU2310 Metallo-beta-lactamase family protein

Details for DVU2310 - Metallo-beta-lactamase family protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU2310

Tuberculist Genomic Region

DVU0242 SEC-C motif domain protein

Details for DVU0242 - SEC-C motif domain protein

GO Terms: NA

PATRIC Pathways: NA

Essentiality: Griffin Essential: NA | In vitro Essential: NA | In vivo Essential: NA

Go to Gene Page: DVU0242

Tuberculist Genomic Region

Displaying 1 - 13 of 13

Motifs

Motif 1: e-value: 2700 e-value: 2900

Module Plots

Regulation

Regulator Interaction Influence Weight Other Influences

DVU0813

Heat-inducible transcription repressor HrcA
 up-regulates 0.47

DVU0813

DVU2547

Transcriptional regulator, putative
 up-regulates 0.28

DVU2547

DVU3111

Transcriptional regulator, Crp/Fnr family
 up-regulates 0.12

DVU3111

GO Enrichment

Category: MF
Category GO ID GO Term Annotated Expected Significant p-value
MF GO:0005524 ATP binding 301 1.41 5 0.0034
MF GO:0032559 adenyl ribonucleotide binding 303 1.42 5 0.0035
MF GO:0030554 adenyl nucleotide binding 304 1.42 5 0.0035
MF GO:0035639 purine ribonucleoside triphosphate bindi... 325 1.52 5 0.0049
MF GO:0001882 nucleoside binding 327 1.53 5 0.0050
MF GO:0001883 purine nucleoside binding 327 1.53 5 0.0050
MF GO:0032549 ribonucleoside binding 327 1.53 5 0.0050
MF GO:0032550 purine ribonucleoside binding 327 1.53 5 0.0050
MF GO:0032555 purine ribonucleotide binding 332 1.56 5 0.0054
MF GO:0017076 purine nucleotide binding 333 1.56 5 0.0055
MF GO:0032553 ribonucleotide binding 345 1.62 5 0.0065
MF GO:0097367 carbohydrate derivative binding 345 1.62 5 0.0065
MF GO:0043168 anion binding 371 1.74 5 0.0091
MF GO:0000166 nucleotide binding 377 1.77 5 0.0098
MF GO:1901265 nucleoside phosphate binding 377 1.77 5 0.0098
MF GO:0036094 small molecule binding 383 1.79 5 0.0106
MF GO:0043167 ion binding 422 1.98 5 0.0167

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