PHATRDRAFT_44745 ubiquitin specific protease 22 (Peptidase_C19 superfamily)
Phaeodactylum tricornutum

   

Summary

Chromosome Product Transcript Start End Strand Short Name
PHATRDRAFT_44745 chr_5 ubiquitin specific protease 22 (Peptidase_C19 superfamily) 113724 117299 -

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Phatr_hclust_0046

Motif-Guided Biclusters

Normalized Mean Residue
Phatr_bicluster_0080
 0.29

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C19 superfamily Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove... - 218.396 2.44E-63 663 - 1072 superfamily 261337
zf-UBP Zn-finger in ubiquitin-hydrolases and other protein; Zn-finger in ubiquitin-hydrolases and other... cl09957 54.6247 3.58E-09 466 - 554 specific 251121
zf-UBP superfamily Zn-finger in ubiquitin-hydrolases and other protein; Zn-finger in ubiquitin-hydrolases and other... - 54.6247 3.58E-09 466 - 554 superfamily 263936
UCH Ubiquitin carboxyl-terminal hydrolase; Ubiquitin carboxyl-terminal hydrolase. - 172.978 1.96E-47 661 - 1071 multi-dom 249862

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
21364 Not available 269813 306147 Not available Not available AT5G10790.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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