PHATRDRAFT_8000 rnafamily protein (SpoU_methylase superfamily)
Phaeodactylum tricornutum

   

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
PHATRDRAFT_8000	chr_18	rnafamily protein (SpoU_methylase superfamily)	414962	415522	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Phatr_hclust_0141

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Phatr_bicluster_0127	0.23	1.1 59

Most Highly Correlated Transcripts

Not available

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
SpoU_methylase superfamily		SpoU rRNA Methylase family; This family of proteins probably use S-AdoMet.	-	78.7052	1.69E-19	1 - 119	superfamily	266618

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
22808		Not available	142076	189360	Not available	Cre01.g027350.t1.2	AT4G17610.1	495108

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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