Phatr_hclust_0141 Hierarchical Clustering
Phaeodactylum tricornutum

Cluster Plot Conditions Plot Dendrogram
GO ID Go Term p-value q-value Cluster
GO:0006396 RNA processing 0.00010905 0.343506 Phatr_hclust_0141
GO:0006350 transcription 0.00415482 1 Phatr_hclust_0141
GO:0016481 negative regulation of transcription 0.00936417 1 Phatr_hclust_0141
GO:0051336 regulation of hydrolase activity 0.0278439 1 Phatr_hclust_0141
GO:0042254 ribosome biogenesis and assembly 0.0278439 1 Phatr_hclust_0141
GO:0006352 transcription initiation 0.0549522 1 Phatr_hclust_0141
GO:0006306 DNA methylation 0.0899841 1 Phatr_hclust_0141
GO:0006865 amino acid transport 0.123783 1 Phatr_hclust_0141
GO:0006511 ubiquitin-dependent protein catabolism 0.1917 1 Phatr_hclust_0141
GO:0006418 tRNA aminoacylation for protein translation 0.218189 1 Phatr_hclust_0141
PHATRDRAFT_17029 : rna polymerase sigma factor (Sig70-cyanoRpoD)
PHATRDRAFT_31465 : atp synthase alpha subunit mitochondrial (RecA-like_NTPases superfamily)
PHATRDRAFT_18579 : at1g56110 t6h22_9 (SIK1)
PHATRDRAFT_48338 : caf1 family (CAF1 superfamily)
PHATRDRAFT_20335 : dhx33 protein (HA2)
PHATRDRAFT_44096 : rna methylase (COG0116)
PHATRDRAFT_36743 : (Ribosomal_L7Ae)
PHATRDRAFT_9235 : rpa2_schpo probable dna-directed rna polymerase i subunit rpa2 (dna-directed rna polymerase i polypeptide 2) (rna polymerase i subunit 2) (RpoB)
PHATRDRAFT_43579 : lethal in the absence of ssd1-v (Las1 superfamily)
PHATRDRAFT_15639 : mitochondrial carrier protein (Mito_carr)
PHATRDRAFT_30585 : transcription-repair coupling factor (HELICc)
PHATRDRAFT_37009 : tfp pilus assembly
PHATRDRAFT_39714 : dead (asp-glu-ala-asp) box polypeptide 28 (DEXDc superfamily)
PHATRDRAFT_5128 : proteasome component pre2 precursor (Ntn_hydrolase superfamily)
PHATRDRAFT_47056 : tpr domain protein
PHATRDRAFT_51277 : drg-like obg family gtpase fused to an rna binding domain tgsfun11p (DRG)
PHATRDRAFT_21922 : gtp-binding protein era (era)
PHATRDRAFT_48410 : brain protein 16 (DUF383 superfamily)
PHATRDRAFT_15354 : rrp5 protein homolog (programmed cell death protein 11)
PHATRDRAFT_39419 : mitochondrial outer membrane beta-barrel protein tob55 omp85 sam50 (Bac_surface_Ag superfamily)
PHATRDRAFT_41745 : loc496075 protein (UPF0160)
PHATRDRAFT_8000 : rnafamily protein (SpoU_methylase superfamily)
PHATRDRAFT_54710 : protein arginine n-methyltransferase prote (AdoMet_MTases)
PHATRDRAFT_44311 : sam-dependent methyltransferase-like (COG1092)
PHATRDRAFT_11088 : leucyl-trnacytoplasmic (leucine--trna ligase) (PLN02959)
PHATRDRAFT_15019 : rrna methylase family protein (SpoU)
PHATRDRAFT_14996 : yggt family membrane protein (YGGT)
PHATRDRAFT_47116 : polymeraseiii (dna directed) polypeptide c
PHATRDRAFT_50071 : amino acid transporter-like protein (Aa_trans superfamily)
PHATRDRAFT_51630 : calcitonin gene-related peptide-receptor component protein (RNA_pol_Rpb4)
PHATRDRAFT_16364 : phosphatidylinositol 4-kinase (PI3Kc_like superfamily)
PHATRDRAFT_39052 : pentatricopeptiderepeat-containing protein (PPR_2)
PHATRDRAFT_46132 : transportin 2 (importinkaryopherin beta 2b) (KAP95)
PHATRDRAFT_55067 : programmed cell death 2 (PDCD2_C superfamily)
PHATRDRAFT_14366 : (PTZ00168)
PHATRDRAFT_43677 : ribonuclease ii (RNB)
PHATRDRAFT_44242 : u3 snornp protein utp4 (WD40 superfamily)
PHATRDRAFT_16911 : yad7_schpo uncharacterized rna methyltransferase (TrmA)
PHATRDRAFT_17059 : conserved hypothetical portein
PHATRDRAFT_50103 : glutamate ornithine acetyltransferase (DUF647 superfamily)
Condition Condition Difference FDR
Re-illuminated_6h Re-illuminated_6h -0.614 0.000505051
Copper_SH Copper_SH 0.269 0.000952381
Green_vs_Red_24h Green_vs_Red_24h 0.209 0.0166667
Silver_SH Silver_SH 0.098 0.16246
Cadmium_1.2mg Cadmium_1.2mg -0.164 0.00104167
BlueLight_24h BlueLight_24h 0.204 0.0455556
GreenLight_0.5h GreenLight_0.5h -0.385 0.11615
RedLight_6h RedLight_6h -0.910 0.000694444
light_16hr_dark_7.5hr light_16hr_dark_7.5hr -0.000 1
GreenLight_24h GreenLight_24h 0.084 0.617134
light_6hr light_6hr -1.455 0.000561798
dark_8hr_light_3hr dark_8hr_light_3hr -0.782 0.00060241
Blue_vs_Green_6h Blue_vs_Green_6h 0.011 0.908562
Ammonia_SH Ammonia_SH 3.458 0.000344828
Simazine_SH Simazine_SH -0.307 0.00078125
Oil_SH Oil_SH 0.183 0.0188356
Salinity_15ppt_SH Salinity_15ppt_SH 0.081 0.320596
Cadmium_SH Cadmium_SH -0.378 0.000666667
Blue_vs_Red_24h Blue_vs_Red_24h 0.329 0.00166667
highlight_0to6h highlight_0to6h 0.381 0.000806452
BlueLight_0.5h BlueLight_0.5h -0.765 0.0102564
Dispersant_SH Dispersant_SH -0.072 0.371077
light_16hr_dark_4hr light_16hr_dark_4hr -0.111 0.174706
light_15.5hr light_15.5hr -0.169 0.325
light_10.5hr light_10.5hr -1.680 0.000561798
Dispersed_oil_SH Dispersed_oil_SH -0.085 0.273563
Si_free Si_free 0.084 0.385714
Re-illuminated_0.5h Re-illuminated_0.5h -0.937 0.000396825
Mixture_SH Mixture_SH 3.251 0.000357143
Blue_vs_Red_6h Blue_vs_Red_6h 0.233 0.0591463
light_16hr_dark_30min light_16hr_dark_30min 0.041 0.85993
BlueLight_6h BlueLight_6h -0.677 0.000581395
highlight_12to48h highlight_12to48h 0.920 0.000555556
RedLight_24h RedLight_24h -0.125 0.287154
Dark_treated Dark_treated -2.295 0.000446429
GreenLight_6h GreenLight_6h -0.688 0.000609756
Cadmium_0.12mg Cadmium_0.12mg -0.017 0.595779
Blue_vs_Green_24h Blue_vs_Green_24h 0.120 0.0211538
RedLight_0.5h RedLight_0.5h 0.167 0.588484
Green_vs_Red_6h Green_vs_Red_6h 0.222 0.0726744
Re-illuminated_24h Re-illuminated_24h 0.311 0.000657895
MEME Output