19598 Tryp_SPc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
19598 chr_17 Tryp_SPc 541368 543083 + Tryp_SPc

Synonyms

NCBI ID Ensembl Genomes exon ID
7453082 Thaps19598.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0096

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0032
 0.47

Most Highly Correlated Transcripts

260761

HA
0.8217

10935

Ion_trans
0.813

1986

MATE_like superfamily
0.8117

25944

p450 superfamily
0.801

20868

hypothetical protein
0.7975

21238

(ALD3) ALDH_F3-13-14_CALDH-like
0.7972

14028

Sugar_tr
0.7947

5212

(Tp_CCCH26) regulator [Rayko]
0.79

10525

hypothetical protein
0.7873

1316

hypothetical protein
0.7861

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 182.091 3.63E-53 105 - 398 superfamily 238113
Tryp_SPc superfamily Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are... - 182.091 3.63E-53 105 - 398 superfamily 238113
Tryp_SPc Trypsin-like serine protease; Many of these are synthesised as inactive precursor zymogens that are... - 179.796 2.94E-52 104 - 395 multi-dom 214473

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004295 GO:0006508 -

GO:0004295

NA

Details: 
NA
GO Category: 
NA

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

Add comment

Log in to post comments