20778 (Tp_TAZ6) zf-TAZ
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
20778 chr_1 (Tp_TAZ6) zf-TAZ 1242501 1244733 + zf-TAZ

Synonyms

NCBI ID Ensembl Genomes exon ID
7451434 Thaps20778.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0410

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0010
 0.38

Most Highly Correlated Transcripts

4047

hypothetical protein
0.8981

8143

hypothetical protein
0.8723

24178

(Tp_Hox3) regulator [Rayko]
0.8612

263610

COG3899
0.856

24063

COG3899
0.8533

8762

SNF2_N
0.847

263599

COG3899
0.8462

24098

hypothetical protein
0.8461

11713

hypothetical protein
0.8405

21324

hypothetical protein
0.8403

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-TAZ TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... cl02660 63.1515 2.88E-12 544 - 632 specific 251111
zf-TAZ superfamily TAZ zinc finger; The TAZ2 domain of CBP binds to other transcription factors such as the p53 tumor... - 63.1515 2.88E-12 544 - 632 superfamily 261396

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003712 GO:0005634 GO:0006355 -

GO:0003712

transcription cofactor activity

Details: 
Interacting selectively and non-covalently with a regulatory transcription factor and also with the basal transcription machinery in order to modulate transcription. Cofactors generally do not bind DNA, but rather mediate protein-protein interactions between regulatory transcription factors and the basal transcription machinery.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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