24178 (Tp_Hox3) regulator [Rayko]
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
24178 chr_10 (Tp_Hox3) regulator [Rayko] 545620 547471 + regulator [Rayko]

Synonyms

NCBI ID Ensembl Genomes exon ID
7445892 Thaps24178.1, Thaps24178.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0400

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0255
 0.31

Most Highly Correlated Transcripts

23339

hypothetical protein
0.9014

25619

hypothetical protein
0.8979

24063

COG3899
0.8968

6286

hypothetical protein
0.8906

12836

EEP superfamily
0.8891

4573

hypothetical protein
0.8886

25356

DUF1325 superfamily
0.8823

7121

DUF3684 superfamily
0.8815

8535

hypothetical protein
0.8801

4445

hypothetical protein
0.8772

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_50050 PHATRDRAFT_50050 Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0003700 GO:0005634 GO:0006355 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0003700

sequence-specific DNA binding transcription factor activity

Details: 
Interacting selectively and non-covalently with a specific DNA sequence in order to modulate transcription. The transcription factor may or may not also interact selectively with a protein or macromolecular complex.
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006355

regulation of transcription, DNA-templated

Details: 
Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO Category: 
BP

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