23686 Sun
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
23686 chr_8 Sun 211527 213743 + Sun

Synonyms

NCBI ID Ensembl Genomes exon ID
7452426 Thaps23686.2, Thaps23686.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0483

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0124
 0.37

Most Highly Correlated Transcripts

bd1821

(bd1821) NA
0.9121

bd1803

(bd1803) NA
0.8766

268516

hypothetical protein
0.8412

20982

Grp1_Fun34_YaaH superfamily
0.8356

bd1891

(bd1891) COG3899
0.8328

bd740

(bd740) NA
0.8265

7379

(Tp_HSF_2.6d) HSF_DNA-bind superfamily
0.8258

bd1749

(bd1749) NA
0.8199

263374

NagC
0.8163

21548

hypothetical protein
0.8029

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sun tRNA and rRNA cytosine-C5-methylases [Translation, ribosomal structure and biogenesis] - 142.914 2.20E-37 189 - 545 multi-dom 223222

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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