261422 (MAP4) MetAP1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261422 chr_2 (MAP4) MetAP1 1311148 1312366 - MetAP1

Synonyms

NCBI ID Ensembl Genomes exon ID
7448858 Thaps261422.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0160
 0.28

Most Highly Correlated Transcripts

31829

CBS_like
0.9321

5135

Rubis-subs-bind
0.9302

35684

dak_ATP
0.9267

262207

Trp-synth-beta_II superfamily
0.9214

268592

VDE superfamily
0.9149

4980

TRAM_LAG1_CLN8
0.9131

268773

Gst
0.9121

5415

Thioredoxin_like superfamily
0.9115

16737

Mito_carr
0.9086

9513

hypothetical protein
0.9078

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MetAP1 Methionine Aminopeptidase 1. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and Peptidase M... cl00279 356.418 4.97E-122 126 - 365 specific 238519
APP_MetAP superfamily A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as... - 356.418 4.97E-122 126 - 365 superfamily 260321
PRK12318 methionine aminopeptidase; Provisional - 230.476 2.58E-72 72 - 365 multi-dom 183434

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 65379 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008235 GO:0004239 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008235

metalloexopeptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0004239

NA

Details: 
NA
GO Category: 
NA

Add comment

Log in to post comments