262056 (RS20) Ribosomal_S10 superfamily
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
262056 chr_4 (RS20) Ribosomal_S10 superfamily 349185 349697 - Ribosomal_S10 superfamily
NCBI ID Ensembl Genomes exon ID
7442075 Thaps262056.2, Thaps262056.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029
Normalized Mean Residue
Thaps_bicluster_0052
0.43
PKCI_related
0.895
(RL15) PTZ00026
0.8908
(RS23) Ribosomal_S23
0.8867
PRK09427
0.8854
(bd1221) recQ_fam
0.8691
PLN02627
0.8671
Aldolase_Class_I superfamily
0.8601
Ribosomal_L7Ae
0.8545
EHD
0.8543
(RS4) PLN00036
0.8513
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Ribosomal_S10 superfamily Ribosomal protein S10p/S20e; This family includes small ribosomal subunit S10 from prokaryotes and... - 177.314 5.80E-58 15 - 121 superfamily 260346
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_51291 PHATRDRAFT_51291 169294 305103 414756 Cre16.g660150.t1.2 AT3G47370.3 285181
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 GO:0015935 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP

small ribosomal subunit

Details: 
The smaller of the two subunits of a ribosome.
GO Category: 
CC
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