262553 Voltage_gated_ClC
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262553 chr_5 Voltage_gated_ClC 1386757 1388663 + Voltage_gated_ClC

Synonyms

NCBI ID Ensembl Genomes exon ID
7453207 Thaps262553.4, Thaps262553.1, Thaps262553.3, Thaps262553.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0033

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0250
 0.30

Most Highly Correlated Transcripts

263714

LPLAT_GPAT
0.92

268592

VDE superfamily
0.917

31169

PRX_BCP
0.9066

269147

NAD_binding_8 superfamily
0.9049

36858

2A0114
0.8991

22208

COG0075
0.8817

4465

hypothetical protein
0.878

28125

PLN00203
0.8776

33663

PLN02649
0.8763

5504

hypothetical protein
0.8746

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Voltage_gated_ClC CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl-... cl02915 231.684 5.98E-70 130 - 558 specific 238233
Voltage_gated_ClC superfamily CLC voltage-gated chloride channel. The ClC chloride channels catalyse the selective flow of Cl-... - 231.684 5.98E-70 130 - 558 superfamily 261508

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_43785 PHATRDRAFT_43785 267437 247807 461087 Cre01.g037150.t1.1 AT1G55620.2 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005247 GO:0006821 GO:0016020 -

GO:0005247

voltage-gated chloride channel activity

Details: 
Catalysis of the transmembrane transfer of a chloride ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO Category: 
MF

GO:0006821

chloride transport

Details: 
The directed movement of chloride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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