264001 COG1233
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264001 chr_13 COG1233 432010 433393 + COG1233

Synonyms

NCBI ID Ensembl Genomes exon ID
7445754 Thaps264001.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0155

Most Highly Correlated Transcripts

bd624

(bd624) Glyco_transf_34 superfamily
0.9377

bd1949

(bd1949) NA
0.9121

bd446

(bd446) HrpA
0.9057

12836

EEP superfamily
0.9045

bd392

(bd392) DEXDc
0.8981

2581

hypothetical protein
0.8898

25318

AAT_I superfamily
0.8857

269663

(COP4) SEC21
0.8695

1600

Glyco_tranf_GTA_type superfamily
0.8688

263663

RPE65
0.8653

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_8 NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. cl19134 60.2023 1.42E-11 7 - 78 specific 257775
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 60.2023 1.42E-11 7 - 78 superfamily 267487
COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and... - 123.699 3.31E-31 4 - 461 multi-dom 224154

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 208311 183754 Not available Cre12.g560900.t1.2 AT3G09580.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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