26573 (ChlH1) PLN03069
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26573 chr_1 (ChlH1) PLN03069 731937 736224 + PLN03069

Synonyms

NCBI ID Ensembl Genomes exon ID
7453447 Thaps26573.1, Thaps26573.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0015

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0237
 0.26

Most Highly Correlated Transcripts

bd218

(bd218) Chloroa_b-bind superfamily
0.9585

bd1378

(bd1378) atpI
0.9563

10234

PLN00093
0.9546

bd1318

(bd1318) atpF
0.9476

bd1290

(bd1290) atpH
0.9474

575

PRK00062
0.9465

262279

PT_UbiA_chlorophyll
0.9463

bd598

(bd598) atpG
0.9456

270336

hypothetical protein
0.9419

32201

Cob-chelat-sub
0.94

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CobN_like superfamily CobN subunit of cobaltochelatase, bchH and chlH subunits of magnesium chelatases, and similar... - 957.023 0 99 - 1213 superfamily 199903
CobN_like superfamily CobN subunit of cobaltochelatase, bchH and chlH subunits of magnesium chelatases, and similar... - 957.023 0 99 - 1213 superfamily 199903
PLN03069 magnesiumprotoporphyrin-IX chelatase subunit H; Provisional - 2325.93 0 1 - 1221 multi-dom 215557

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 266498 323781 317426 Cre07.g325500.t1.1 AT5G13630.2 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0009058 GO:0016851 -

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016851

magnesium chelatase activity

Details: 
Catalysis of the reaction: ATP + H(2)O + Mg(2+) + protoporphyrin IX = ADP + 2 H(+) + magnesium protoporphyrin IX + phosphate.
GO Category: 
MF

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