268331 WD40
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
268331 chr_2 WD40 1785836 1788919 - WD40
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220
Normalized Mean Residue
Thaps_bicluster_0257
0.20
(bd1876) NatB_MDM20 superfamily
0.9716
hypothetical protein
0.9456
TPR
0.9445
0.9412
DUF1253
0.9387
Cupin_8 superfamily
0.9302
(Tp_Myb2R3) ZUO1
0.9238
BMS1
0.9232
COG5593
0.9189
COG2319
0.9161
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 81.9976 3.28E-17 70 - 428 superfamily 238121
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 81.9976 3.28E-17 70 - 428 superfamily 238121
Utp12 superfamily Dip2/Utp12 Family; This domain is found at the C-terminus of proteins containing WD40 repeats.... - 81.8696 3.37E-18 798 - 904 superfamily 252308
Utp12 superfamily Dip2/Utp12 Family; This domain is found at the C-terminus of proteins containing WD40 repeats.... - 81.8696 3.37E-18 798 - 904 superfamily 252308
WD40 superfamily WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions... - 81.9976 3.28E-17 70 - 428 superfamily 238121
COG2319 FOG: WD40 repeat [General function prediction only] - 89.3775 6.43E-19 63 - 603 multi-dom 225201
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_25666 PHATR_25666 213569 204669 467193 Cre06.g254150.t1.2 AT1G15440.2 325739
KEGG description KEGG Pathway
Ribosome biogenesis in eukaryotes map03008
GO:0004197 GO:0006508 -

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP
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