268650 (APB2) PTZ00429Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268650	chr_4	(APB2) PTZ00429	668435	671189	-	PTZ00429

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452624	Thaps268650.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0075

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0181	0.40	44000 0.00011

Most Highly Correlated Transcripts

43150 PolyPPase_VTC4_like 0.9227	34876 (COP1) Coatomer_WDAD 0.9087	23013 Trs65 0.903	1820 SET 0.8988	bd446 (bd446) HrpA 0.8977	5659 hypothetical protein 0.8961
9166 hypothetical protein 0.8959	24285 hypothetical protein 0.8887	7044 Adaptin_N 0.8872	261756 pepN 0.886

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PTZ00429		beta-adaptin; Provisional	-	288.755	6.19E-85	42 - 775	multi-dom	240415

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_54730	PHATRDRAFT_54730	181396	24751	Not available	Cre05.g234665.t1.1	AT5G11490.2	536781

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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