43150 PolyPPase_VTC4_like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
43150 chr_24 PolyPPase_VTC4_like 114529 117073 - PolyPPase_VTC4_like

Synonyms

NCBI ID Ensembl Genomes exon ID
7452003 Thaps43150.3, Thaps43150.2, Thaps43150.4, Thaps43150.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0175

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0238
 0.33

Most Highly Correlated Transcripts

bd1893

(bd1893) NA
0.9236

268650

(APB2) PTZ00429
0.9227

4767

hypothetical protein
0.9064

25677

MgtE superfamily
0.9004

bd463

(bd463) Aa_trans superfamily
0.89

7188

PKc_like superfamily
0.8868

1820

SET
0.8855

24155

APH_ChoK_like superfamily
0.8851

264556

FBPase
0.885

bd790

(bd790) ABCC_MRP_domain2
0.8836

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PolyPPase_VTC4_like Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) protein VTC4,... cl11964 454.126 8.61E-157 63 - 343 specific 143623
CYTH-like_Pase superfamily CYTH-like (also known as triphosphate tunnel metalloenzyme (TTM)-like) Phosphatases; CYTH-like... - 454.126 8.61E-157 63 - 343 superfamily 264489
VTC1 Vacuolar transporter chaperone [Posttranslational modification, protein turnover, chaperones] cl09954 94.7508 6.30E-23 471 - 577 specific 227589
DUF202 superfamily Domain of unknown function (DUF202); This family consists of hypothetical proteins some of which... - 94.7508 6.30E-23 471 - 577 superfamily 263935

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
22643 PHATRDRAFT_50019 PHATRDRAFT_50019 237325 68375 438229 Cre09.g402775.t1.1 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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