3426 zf-DNL superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
3426	chr_3	zf-DNL superfamily	930756	931641	-	zf-DNL superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448479	Thaps3426.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0269	0.41	25000 54000

Most Highly Correlated Transcripts

270222 0.9616	11187 hypothetical protein 0.9047	1871 hypothetical protein 0.9035	26991 GRX_GRXh_1_2_like 0.903	7469 hypothetical protein 0.903	37934 GRX_PICOT_like 0.9017
2463 hypothetical protein 0.8994	8121 hypothetical protein 0.8967	31845 PLN02428 0.8966	25535 hypothetical protein 0.8962

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
zf-DNL superfamily		DNL zinc finger; The domain is named after a short C-terminal motif of D(N/H)L. This domain is a...	-	82.2682	3.39E-20	161 - 231	superfamily	253064

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_37590	PHATRDRAFT_37590	235297	69503	223045	Not available	AT3G54826.1	259700

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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