34864 FkpA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
34864 chr_6 FkpA 1442460 1443180 - FkpA

Synonyms

NCBI ID Ensembl Genomes exon ID
7442736 Thaps34864.2, Thaps34864.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0029

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0094
 0.37

Most Highly Correlated Transcripts

bd846

(bd846) NA
0.9107

33008

PLN02338
0.9104

268474

PLN02657
0.9013

bd1150

(bd1150) PLN02433
0.8989

575

PRK00062
0.8952

719

PLN02433
0.8936

35878

PLN02307
0.8919

35712

Phosphoglycerate_kinase
0.8911

263427

PLN02372
0.8901

32321

TRX_family
0.8898

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
FKBP_C FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. cl19519 118.883 4.29E-34 124 - 209 specific 249719
FKBP_C superfamily FKBP-type peptidyl-prolyl cis-trans isomerase; FKBP-type peptidyl-prolyl cis-trans isomerase. - 118.883 4.29E-34 124 - 209 superfamily 267872
FkpA FKBP-type peptidyl-prolyl cis-trans isomerases 1 [Posttranslational modification, protein turnover... - 185.696 1.12E-58 9 - 213 multi-dom 223619

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_12254 PHATRDRAFT_12254 268130 319767 457206 Cre16.g675550.t1.2 Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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