40586 (GMD1) PLN02653
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
40586 chr_5 (GMD1) PLN02653 154902 156857 - PLN02653
NCBI ID Ensembl Genomes exon ID
7448453 Thaps40586.2, Thaps40586.1, Thaps40586.3
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0212
Normalized Mean Residue
Thaps_bicluster_0269
0.41
GRX_GRXh_1_2_like
0.8839
cyclophilin_ABH_like
0.8839
COG1272
0.8743
Guanylate_kin
0.8733
Synaptobrevin
0.8688
hypothetical protein
0.8671
Methyltransf_22 superfamily
0.8665
hypothetical protein
0.8629
Mitofilin
0.8605
PTZ00184
0.8566
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GDP_MD_SDR_e GDP-mannose 4,6 dehydratase, extended (e) SDRs; GDP-mannose 4,6 dehydratase, a homodimeric SDR,... cl09931 531.403 0 6 - 346 specific 187570
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 531.403 0 6 - 346 superfamily 263925
PLN02653 GDP-mannose 4,6-dehydratase - 637.202 0 1 - 357 multi-dom 178259
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_25417 PHATRDRAFT_25417 206067 263429 434640 Not available AT5G66280.1 486654
KEGG description KEGG Pathway
Metabolic pathways map01100
GO:0008152 GO:0016491 GO:0008446 GO:0009058 -

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GDP-mannose 4,6-dehydratase activity

Details: 
Catalysis of the reaction: GDP-alpha-D-mannose = GDP-4-dehydro-6-deoxy-alpha-D-mannose + H(2)O.
GO Category: 
MF

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP
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