42992 (AOX2) AOX
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
42992 chr_20 (AOX2) AOX 709457 710461 + AOX

Synonyms

NCBI ID Ensembl Genomes exon ID
7443639 Thaps42992.2, Thaps42992.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0113

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0283
 0.35

Most Highly Correlated Transcripts

261882

Thioredoxin_like superfamily
0.8831

bd1835

(bd1835) NA
0.8595

bd1839

(bd1839) NA
0.8553

bd692

(bd692) NA
0.8514

37058

TRX_family
0.8476

bd1756

(bd1756) NA
0.8419

bd1840

(bd1840) NA
0.8391

11383

hypothetical protein
0.832

37934

GRX_PICOT_like
0.8272

16075

tpt
0.827

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AOX Alternative oxidase, ferritin-like diiron-binding domain; Alternative oxidase (AOX) is a... cl00264 252.513 4.96E-84 84 - 257 specific 153112
Ferritin_like superfamily Ferritin-like superfamily of diiron-containing four-helix-bundle proteins; Ferritin-like, diiron-... - 252.513 4.96E-84 84 - 257 superfamily 260311

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_bd176 PHATRDRAFT_bd176 198682 253737 444285 Not available Not available 488439

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005740 GO:0007585 GO:0016491 GO:0051341 -

GO:0005740

mitochondrial envelope

Details: 
The double lipid bilayer enclosing the mitochondrion and separating its contents from the cell cytoplasm; includes the intermembrane space.
GO Category: 
CC

GO:0007585

respiratory gaseous exchange

Details: 
The process of gaseous exchange between an organism and its environment. In plants, microorganisms, and many small animals, air or water makes direct contact with the organism's cells or tissue fluids, and the processes of diffusion supply the organism with dioxygen (O2) and remove carbon dioxide (CO2). In larger animals the efficiency of gaseous exchange is improved by specialized respiratory organs, such as lungs and gills, which are ventilated by breathing mechanisms.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0051341

regulation of oxidoreductase activity

Details: 
Any process that modulates the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
BP

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