6015 CIA30 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
6015	chr_6	CIA30 superfamily	491638	492585	+	CIA30 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448562	Thaps6015.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0033

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0250	0.30	0.0011 2200

Most Highly Correlated Transcripts

36669 TPT 0.9109	268592 VDE superfamily 0.8906	31829 CBS_like 0.8728	26991 GRX_GRXh_1_2_like 0.8725	23953 hypothetical protein 0.8724	36235 p450 superfamily 0.8704
21250 hypothetical protein 0.8652	21957 PAP_fibrillin superfamily 0.8645	4465 hypothetical protein 0.8638	8872 hypothetical protein 0.8617

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CIA30 superfamily		Complex I intermediate-associated protein 30 (CIA30); This protein is associated with mitochondrial...	-	85.7179	1.51E-20	164 - 307	superfamily	254872

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	198882	214755	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments