6606 obgE
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
6606 chr_6 obgE 2020752 2022821 - obgE

Synonyms

NCBI ID Ensembl Genomes exon ID
7446376 Thaps6606.2, Thaps6606.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0273

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0196
 0.36

Most Highly Correlated Transcripts

263669

UvrD
0.9071

268352

P-ATPase-V
0.8733

263644

(TopoII_2) PLN03128
0.8694

bd763

(bd763) NA
0.8692

262858

(IKI3) IKI3
0.8658

21860

PRP40
0.8655

14890

Cupin_8 superfamily
0.8599

264188

COG1026
0.8559

20682

hypothetical protein
0.855

23442

hypothetical protein
0.8515

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Obg Obg GTPase; The Obg nucleotide binding protein subfamily has been implicated in stress response,... cl17170 193.41 4.47E-58 357 - 552 specific 206685
Ras_like_GTPase superfamily Rat sarcoma (Ras)-like superfamily of small guanosine triphosphatases (GTPases); Ras-like GTPase... - 193.41 4.47E-58 357 - 552 superfamily 266525
GTP1_OBG superfamily GTP1/OBG; The N-terminal domain of B. subtilis GTPase obgE has the OBG fold, which is formed by... - 64.6525 2.65E-12 144 - 346 superfamily 110047
obgE GTPase CgtA; Reviewed - 260.388 3.38E-81 144 - 558 multi-dom 237048

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
20923 PHATRDRAFT_44627 PHATRDRAFT_44627 188718 211099 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005525 -

GO:0005525

GTP binding

Details: 
Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO Category: 
MF

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