8063 SDR_c
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
8063 chr_9 SDR_c 662769 663792 - SDR_c

Synonyms

NCBI ID Ensembl Genomes exon ID
7453050 Thaps8063.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0024

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0102
 0.20

Most Highly Correlated Transcripts

5240

ALAD_PBGS_aspartate_rich
0.9555

5063

hypothetical protein
0.9444

bd672

(bd672) NA
0.9436

261608

PLN02585
0.9375

261232

URO-D
0.9361

575

PRK00062
0.9346

5632

hypothetical protein
0.9318

719

PLN02433
0.9313

5077

PLN00015
0.9244

3327

hypothetical protein
0.9237

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
SDR_c classical (c) SDRs; SDRs are a functionally diverse family of oxidoreductases that have a single... cl09931 152.053 8.73E-44 52 - 275 specific 212491
NADB_Rossmann superfamily Rossmann-fold NAD(P)(+)-binding proteins; A large family of proteins that share a Rossmann-fold NAD... - 152.053 8.73E-44 52 - 275 superfamily 263925
fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional - 124.596 2.14E-33 44 - 298 multi-dom 237218

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44908 PHATRDRAFT_44908 Not available 218089 445986 Cre14.g608800.t1.2 AT5G04900.1 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0008152 GO:0016491 GO:0004316 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0004316

3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity

Details: 
Catalysis of the reaction: (3R)-3-hydroxyacyl-[acyl-carrier protein] + NADP+ = 3-oxoacyl-[acyl-carrier protein] + NADPH + H+.
GO Category: 
MF

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