ThpsCt018 (trnP(ugg)) Thalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
ThpsCt018	chloroplast	(trnP(ugg))	65330	65403	-

Synonyms

NCBI ID	Ensembl Genomes exon ID
4524874	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0061

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0052	0.43	12000 16

Most Highly Correlated Transcripts

bd1287 (bd1287) PRK09281 0.9231	bd1380 (bd1380) ycf39 0.9049	bd208 (bd208) DUF3529 0.8901	33008 PLN02338 0.8666	bd1545 (bd1545) psbC 0.8628	bd1403 (bd1403) NA 0.8608
ThpsCt031 (trnP(ugg)') 0.8581	bd1313 (bd1313) psbH 0.857	bd1350 (bd1350) psaF 0.8485	ThpsCt025 (trnL(uaa)) 0.8457

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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